PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026169.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 423aa MW: 47755.2 Da PI: 5.6575

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026169.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.5	2.5e-34	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sws++++sf+v+++ efa+++Lpk+Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ + +++i+ PCP026169.1 14 FLSKTYEMVDDASTDSIVSWSASNKSFIVWNPPEFARDLLPKFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFIRGQPHIMKNIR 101 9******************999************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PCP026169.1 102 RRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MEEVQGGTSS LPPFLSKTYE MVDDASTDSI VSWSASNKSF IVWNPPEFAR DLLPKFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFANDDFI RGQPHIMKNI RRRKPVHSHS LQNLQVQGQG 120 TSLSEAERQS MKVEIERLKH EKERLGVEVQ RHEQERHGLE LQMQFLMDRL QDMEKQQQTM 180 AAFVARVLQK PGIASNPVPQ LEVRERKRRL PRISWSFDDA NSGYNQMVSS QAVIRESGSM 240 EKLEQLESFL TFWEDTIHDV SHNNIQVGSN READESTSGN ESTALSSIQL NADIRSKSPG 300 IDMNAEPPAS VAPKPAPSQS SKEQTAGIAA SAPTTALIQQ TSKEKTDGTT ASAATGVNDV 360 FWEQFLTENP GTSEAQEVLI ERKDSDGKKN DSKPGDHGML WWNMRNVNNL TEQMGHLTPV 420 EKT

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MEEVQGGTSS LPPFLSKTYE MVDDASTDSI VSWSASNKSF IVWNPPEFAR DLLPKFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFANDDFI RGQPHIMKNI RRRKPVHSHS LQNLQVQGQG  120
TSLSEAERQS MKVEIERLKH EKERLGVEVQ RHEQERHGLE LQMQFLMDRL QDMEKQQQTM  180
AAFVARVLQK PGIASNPVPQ LEVRERKRRL PRISWSFDDA NSGYNQMVSS QAVIRESGSM  240
EKLEQLESFL TFWEDTIHDV SHNNIQVGSN READESTSGN ESTALSSIQL NADIRSKSPG  300
IDMNAEPPAS VAPKPAPSQS SKEQTAGIAA SAPTTALIQQ TSKEKTDGTT ASAATGVNDV  360
FWEQFLTENP GTSEAQEVLI ERKDSDGKKN DSKPGDHGML WWNMRNVNNL TEQMGHLTPV  420
EKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	ERKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-122	HSF family protein