PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026156.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 950aa MW: 102816 Da PI: 6.1959

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026156.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.2e-30	268	327	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt + +Cpv+k+v+rs+ed +++++tYeg+Hnh+ PCP026156.1 268 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVSpSCPVRKQVQRSSEDMSILITTYEGSHNHP 327 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 950 aa Download sequence
MVIPTRPSKA LMENNNTHEE KSFLGKTDVE DNTVKSDGDH EEGTPMETTK GGHGWDVEPD 60 LKPPPTGKDR ALVNHNQDHE LQSTKAEMVE VREENEKLKL LLSQISRDYQ SLQMHLYGLL 120 QNEEETKKCT DASSSSTARD FTHEQNIEEA DDLVSLSLGR TSSSIDQPRK DGRIKNISQL 180 SSTNGKDDDD DDKMLHGAGL ALELGCRSEP AESTDNSSGG PKEDDLTEIW PPSKTLKTTR 240 SGEDEVSQQT HLKKARVSVR ARCDAPTMND GCQWRKYGQK TAKGNPCPRA YYRCTVSPSC 300 PVRKQVQRSS EDMSILITTY EGSHNHPLSM SATAMASTTS AAASMLQSHS STSQQGLFNS 360 ATAPISASTN LQGLNLSSTS TLSQNSRLPQ QHFYFPNSSV STNNFHPTIT LDLTDPTPSH 420 FGRFPLASGS SFSSNPRYPS TSLNFSSSLD HNNTLQLQSP WNSISHTASG YFNYGNRINQ 480 VGSALNIVKQ PIFQEHNKLY QSYIQNQNAF PPPPPPLNHP QMRTDSIATA TKAITSNPNF 540 QSALAAALTS FIGNGGTSST TGIRENHQSG TIVERSPGLK LKRDASIADA VQALSNHHIL 600 SAPVRSPEAD TSADWRGSVN MAEAQEVKER CKLSSYDAYF ETIQSRKKLP RALQEVLTNA 660 FAKIQVSSFP AVPGGKVIEI PADTFIGDAG KILSDNNILS APVKTPEADA SSDWRDRYLG 720 LIDYSAIILW VLENAELAAV AISATSATAA GVGAGAVGAV GALALGVTGP AAVAELTAAA 780 VGAAVAGGTA AEEGIAKDAP TAADELGQDF YNVILKDEPF KSTTVRSILK VKSFCWAPFI 840 PVATDSSMLT VMLLLSKYRL RNVPVIEPGQ PIIKNYITQS GLVQALERCR GRDWFDCIAA 900 KPISDFGLPF MSSDEVISIT SNDLILEPFK RMRDNKIGGL PVVEGKHQRY

Sequence ? help Back to Top

Protein Sequence Length: 950 aa Download sequence

MVIPTRPSKA LMENNNTHEE KSFLGKTDVE DNTVKSDGDH EEGTPMETTK GGHGWDVEPD  60
LKPPPTGKDR ALVNHNQDHE LQSTKAEMVE VREENEKLKL LLSQISRDYQ SLQMHLYGLL  120
QNEEETKKCT DASSSSTARD FTHEQNIEEA DDLVSLSLGR TSSSIDQPRK DGRIKNISQL  180
SSTNGKDDDD DDKMLHGAGL ALELGCRSEP AESTDNSSGG PKEDDLTEIW PPSKTLKTTR  240
SGEDEVSQQT HLKKARVSVR ARCDAPTMND GCQWRKYGQK TAKGNPCPRA YYRCTVSPSC  300
PVRKQVQRSS EDMSILITTY EGSHNHPLSM SATAMASTTS AAASMLQSHS STSQQGLFNS  360
ATAPISASTN LQGLNLSSTS TLSQNSRLPQ QHFYFPNSSV STNNFHPTIT LDLTDPTPSH  420
FGRFPLASGS SFSSNPRYPS TSLNFSSSLD HNNTLQLQSP WNSISHTASG YFNYGNRINQ  480
VGSALNIVKQ PIFQEHNKLY QSYIQNQNAF PPPPPPLNHP QMRTDSIATA TKAITSNPNF  540
QSALAAALTS FIGNGGTSST TGIRENHQSG TIVERSPGLK LKRDASIADA VQALSNHHIL  600
SAPVRSPEAD TSADWRGSVN MAEAQEVKER CKLSSYDAYF ETIQSRKKLP RALQEVLTNA  660
FAKIQVSSFP AVPGGKVIEI PADTFIGDAG KILSDNNILS APVKTPEADA SSDWRDRYLG  720
LIDYSAIILW VLENAELAAV AISATSATAA GVGAGAVGAV GALALGVTGP AAVAELTAAA  780
VGAAVAGGTA AEEGIAKDAP TAADELGQDF YNVILKDEPF KSTTVRSILK VKSFCWAPFI  840
PVATDSSMLT VMLLLSKYRL RNVPVIEPGQ PIIKNYITQS GLVQALERCR GRDWFDCIAA  900
KPISDFGLPF MSSDEVISIT SNDLILEPFK RMRDNKIGGL PVVEGKHQRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-58	WRKY family protein