PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026047.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 609aa MW: 68015.6 Da PI: 5.3615

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026047.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.7	5.8e-36	103	194	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+++++ed++l+++isw + g+sfvv+d++ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+kv++++ weF+++ F+kgk++ll++i+ PCP026047.1 103 FLSKTFDLVEDPSLDSIISWGSGGRSFVVWDQSEFSRFILPRNFKHNNFSSFVRQLNTYGFRKVDTDK---------WEFANEAFQKGKRHLLKRIQ 190 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+ks PCP026047.1 191 RRKS 194 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MSPKDKSHPK SPPTSAEFDP ESIGLSEFRL EVSEPLLGSQ PIPSFTSPVM EFEAFSSVNP 60 LGAFDFTEKV SIPTSSMGGG GAEDVVVPPQ PLECLQGTLV PPFLSKTFDL VEDPSLDSII 120 SWGSGGRSFV VWDQSEFSRF ILPRNFKHNN FSSFVRQLNT YGFRKVDTDK WEFANEAFQK 180 GKRHLLKRIQ RRKSPQSLQV GSFTGPSAEA GKSGVEGEIE TLRKERSMLM QEVVELQQQQ 240 RGTVDRMKVV NQRLQSAEQR QKQMVSFLAK MLQNPAFMAR LQQKTGQKDR GSSRVRRKFV 300 KHQQHELSKS DSDMEGQIVK YQPAWRNQTI SSTAPDSNPV PFEQSPHYPS QVTTGKLCLD 360 AESKAFQFVD AALDELAITQ GFLETPEQEG KGASSMVTEY PFFKGKSVLS PQQEANPEHY 420 VSFEEGLLKD RTFPELFSPG MESMIKQEDI WSMDFDVSAG MSTSMNELWG NPVNYDVPEV 480 GVTGGLLDIW DIDPLQEAGG LGINKWPAHE SAFDEPQSQG VQSASKTTDP SLSSGKVARF 540 RRGNGVVRIG FCPSELVKFQ KGELFEFNSW CTNTNTEEAL MCITLVKSCF EELPAFSKTV 600 RRRLANVQT

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MSPKDKSHPK SPPTSAEFDP ESIGLSEFRL EVSEPLLGSQ PIPSFTSPVM EFEAFSSVNP  60
LGAFDFTEKV SIPTSSMGGG GAEDVVVPPQ PLECLQGTLV PPFLSKTFDL VEDPSLDSII  120
SWGSGGRSFV VWDQSEFSRF ILPRNFKHNN FSSFVRQLNT YGFRKVDTDK WEFANEAFQK  180
GKRHLLKRIQ RRKSPQSLQV GSFTGPSAEA GKSGVEGEIE TLRKERSMLM QEVVELQQQQ  240
RGTVDRMKVV NQRLQSAEQR QKQMVSFLAK MLQNPAFMAR LQQKTGQKDR GSSRVRRKFV  300
KHQQHELSKS DSDMEGQIVK YQPAWRNQTI SSTAPDSNPV PFEQSPHYPS QVTTGKLCLD  360
AESKAFQFVD AALDELAITQ GFLETPEQEG KGASSMVTEY PFFKGKSVLS PQQEANPEHY  420
VSFEEGLLKD RTFPELFSPG MESMIKQEDI WSMDFDVSAG MSTSMNELWG NPVNYDVPEV  480
GVTGGLLDIW DIDPLQEAGG LGINKWPAHE SAFDEPQSQG VQSASKTTDP SLSSGKVARF  540
RRGNGVVRIG FCPSELVKFQ KGELFEFNSW CTNTNTEEAL MCITLVKSCF EELPAFSKTV  600
RRRLANVQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	192	LKRIQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	7e-90	HSF family protein