PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026011.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 435aa MW: 48921.4 Da PI: 7.5636

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.2	1.2e-30	250	304	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHe+Fve+v++LGG++kAtPk+il +m+++gLt+ hvkSHLQkYR+ PCP026011.1 250 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILTMMGLDGLTIFHVKSHLQKYRI 304 68****************************************************7 PP
2	Myb_DNA-binding	47.2	5.2e-15	254	303	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW ++++e++v++v++lGg t+k+I +mg g+t ++ks++qky+ PCP026011.1 254 RWNQDLHEKFVECVNRLGGAdkaTPKAILTMMGlDGLTIFHVKSHLQKYR 303 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MNGKKIDCQE RNQQSHELIG EYGFELGNQS CQIFGQQQQP AWNNMGIWVQ QPTMDHEVSL 60 LQNLGPPNTP SSIISRFESP VSAFYATELY MGGFPQYDSQ AGQNPQFPSG QSNNESYSSM 120 NSSEQDPNFD IRNTLQSIVK SQPSSYQYHK SSEKCNQIPA SDLSGSKLFA HQSNKLHGDH 180 NTTTVRRPSF SLPSKENQDQ VGYCNSFTTS PVTQLSFFSG QGKQPPRISS RHVSDCYGDS 240 SSSSPVLSSK TRIRWNQDLH EKFVECVNRL GGADKATPKA ILTMMGLDGL TIFHVKSHLQ 300 KYRIAKYLPD PAEGKSEKRT TLNVEPQLNV KALLQTYDVN IYRSCLQIKE ALQLQLDVQR 360 RLHEQLETQR KLQLRIEEQG KRLRKMFDLQ QQTSSNPLKA QNSDVTCHEA SPSNSLDDTD 420 QLSTPEGSSF PSKIS

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MNGKKIDCQE RNQQSHELIG EYGFELGNQS CQIFGQQQQP AWNNMGIWVQ QPTMDHEVSL  60
LQNLGPPNTP SSIISRFESP VSAFYATELY MGGFPQYDSQ AGQNPQFPSG QSNNESYSSM  120
NSSEQDPNFD IRNTLQSIVK SQPSSYQYHK SSEKCNQIPA SDLSGSKLFA HQSNKLHGDH  180
NTTTVRRPSF SLPSKENQDQ VGYCNSFTTS PVTQLSFFSG QGKQPPRISS RHVSDCYGDS  240
SSSSPVLSSK TRIRWNQDLH EKFVECVNRL GGADKATPKA ILTMMGLDGL TIFHVKSHLQ  300
KYRIAKYLPD PAEGKSEKRT TLNVEPQLNV KALLQTYDVN IYRSCLQIKE ALQLQLDVQR  360
RLHEQLETQR KLQLRIEEQG KRLRKMFDLQ QQTSSNPLKA QNSDVTCHEA SPSNSLDDTD  420
QLSTPEGSSF PSKIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	4e-63	G2-like family protein