PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025929.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 281aa MW: 31149.7 Da PI: 4.7571

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025929.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.6	1.2e-09	220	252	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ PCP025929.1 220 PYPTEEEKLQLSEMTGLDQKQINNWFINQRKRH 252 8*****************************885 PP
2	ELK	39.3	1.3e-13	172	193	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sL++EF+ PCP025929.1 172 ELKDMLLNKYSGYLSSLRKEFL 193 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MEDFHRMNAG VISAGSDDHV NVHQQVENMA TSTSSANCGG FHGSGHVVDD HNMLLFATEG 60 LGSDHMSDLI KSQIASHPRF PDLVAAYLEC QKVGAPAEMK NLLEEIERAS HPMSTCSEIG 120 ADPELDEFMD CGLIFSNADE GVGSSEEELS CGEVEAAEGQ DTGGARSSGD RELKDMLLNK 180 YSGYLSSLRK EFLKKRKKGK LPKDARSTLS DWWITHYRWP YPTEEEKLQL SEMTGLDQKQ 240 INNWFINQRK RHWKPSEDMR FALNEGVGGS IGGPMMFDTG V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	197	LRKEFLKKRK
2	194	198	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	8e-57	TALE family protein