PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025373.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 275aa MW: 28992 Da PI: 8.5763

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025373.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.1	1.9e-39	36	155	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........... 88 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s ++n ss+ PCP025373.1 36 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSLRGGNTSSSapssdhkpqll 132 78**************************************************************99999777.3344444443333334555566888 PP TCP 89 ......................k 89 + PCP025373.1 133 gptpfilgkrvrgplddhdtnhN 155 88888888776655554444321 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MSNSEDPNNE LTNGGGGGGA MVEQTSQRPS SNGVLAVKKP PSKDRHSKVD GRGRRIRMPI 60 ICAARVFQLT RELGHKSDGQ TIEWLLRQAE PSIIAATGTG TTPASFSTVS VSLRGGNTSS 120 SAPSSDHKPQ LLGPTPFILG KRVRGPLDDH DTNHNHDASA TKNPSDHHAN NDGAVSVVGH 180 SMASMLGPTA GGPGGFWAPH FGQVWSFAAT PPPELMDQSA VSQQQQQQHS LFLQQQPMGE 240 ASAARVGNYL PGHLNLLASL SGGHGNSGQR EDDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-73	TCP family protein