PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025290.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 665aa MW: 76171.3 Da PI: 9.2228

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025290.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.2	2.8e-31	79	132	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk il+lm+v gL+++hvkSHLQ+YR+ PCP025290.1 79 PRLRWTPQLHLSFVHAVERLGGQDRATPKLILQLMNVRGLSISHVKSHLQMYRS 132 8****************************************************7 PP
2	Myb_DNA-binding	47.9	3.1e-15	80	131	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k+I + m+ g++ ++ks++q+y+ PCP025290.1 80 RLRWTPQLHLSFVHAVERLGGQdraTPKLILQLMNvRGLSISHVKSHLQMYR 131 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MDELEFGDQE AEKSNEISEE QVENGSVGSS QKCSSFDLNE EASSDSEERG KGNNAAYNDS 60 EGNERRRVKV RQYVRSKMPR LRWTPQLHLS FVHAVERLGG QDRATPKLIL QLMNVRGLSI 120 SHVKSHLQMY RSKKLDGNGQ VLSEKHESKR GRDNISCMVH QTINQPCRHV YFGMDNGGIV 180 VTTNPHDCQS QPQPDFKAVS RSSSLLNKEL VHGNNSNNSM GKILQTVPIN PSRFLEDKRW 240 PRSETINQQQ WRAKRIPAAK ISWSDDCNGS QSDHLMHHMH TTPRLIRESH NIRPPNWNLG 300 ESRNTRQFPS NSHNSITNSS CYKTEFEPPF GFELNEEKIS KYKEWMPQLE LGLSQSVENY 360 EEKKIISRHR MSTRHPTSNR SHMATSSSGG DLRAPIFNES NYDFWSIKMK TIFKSYDLWN 420 LVDKGIESAE SGDDSSDEDQ KSVKSSMKIN ETRDAKALGI IQGAVSDEIF PRISNFETSK 480 TAWDVLQQEF RGDKKVRSVK LQCLRRDFET IKPKISAEDS IASIIEETKD LDSIEVQDVI 540 DTLKRYEQRL NMHSESLAEK AFSSLSVTER DSSYKAQGNN SNQKKFWKGK GKKWDNKYTP 600 QSKSETSSDS TKTKCKICDK LHYGVCWFKG KPKCTKCDRF GHLAKIVIQE GTKLSTMHIE 660 QKKRK

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MDELEFGDQE AEKSNEISEE QVENGSVGSS QKCSSFDLNE EASSDSEERG KGNNAAYNDS  60
EGNERRRVKV RQYVRSKMPR LRWTPQLHLS FVHAVERLGG QDRATPKLIL QLMNVRGLSI  120
SHVKSHLQMY RSKKLDGNGQ VLSEKHESKR GRDNISCMVH QTINQPCRHV YFGMDNGGIV  180
VTTNPHDCQS QPQPDFKAVS RSSSLLNKEL VHGNNSNNSM GKILQTVPIN PSRFLEDKRW  240
PRSETINQQQ WRAKRIPAAK ISWSDDCNGS QSDHLMHHMH TTPRLIRESH NIRPPNWNLG  300
ESRNTRQFPS NSHNSITNSS CYKTEFEPPF GFELNEEKIS KYKEWMPQLE LGLSQSVENY  360
EEKKIISRHR MSTRHPTSNR SHMATSSSGG DLRAPIFNES NYDFWSIKMK TIFKSYDLWN  420
LVDKGIESAE SGDDSSDEDQ KSVKSSMKIN ETRDAKALGI IQGAVSDEIF PRISNFETSK  480
TAWDVLQQEF RGDKKVRSVK LQCLRRDFET IKPKISAEDS IASIIEETKD LDSIEVQDVI  540
DTLKRYEQRL NMHSESLAEK AFSSLSVTER DSSYKAQGNN SNQKKFWKGK GKKWDNKYTP  600
QSKSETSSDS TKTKCKICDK LHYGVCWFKG KPKCTKCDRF GHLAKIVIQE GTKLSTMHIE  660
QKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-34	G2-like family protein