PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP025242.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 28387.9 Da PI: 6.1861 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 90.5 | 2.2e-28 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++g+w+vtk+++eH+H+l+p PCP025242.1 89 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KVVRQRAETRVGCRAMILVRKVSSGNWVVTKFVKEHSHPLTP 176 ******************************************9988..999************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MVEFALDGDV DGEVVGSSAE MELSRAGDEN ETGGSSVEGA FQLGLDDKIN LDSPQGDIIP 60 EAVPVVSVVP ADEPYEGLEF ETEAAAHAFY NAYATRVGFI IRVSKLSRSR RDGSAIGRAL 120 VCNKEGYRMP DKREKVVRQR AETRVGCRAM ILVRKVSSGN WVVTKFVKEH SHPLTPGKGR 180 RDCIYDQYPN EHDKIRELSQ QLAIEKKRAA TYKRHLDLIF EHIEEHNESL SKKIQRVVES 240 VKEIEGKEQQ GYR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-92 | FAR1 family protein |