PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP025185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | TCP | ||||||||
Protein Properties | Length: 164aa MW: 19070.4 Da PI: 10.1037 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 106.5 | 4.1e-33 | 57 | 129 | 3 | 73 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..sec 73 ++kdrhs ++T++g+RdRR Rls ++a++f+d+qd+LG+d++sk+i+WL++++k+ai +l g++++ + +c PCP025185.1 57 ARKDRHSNVYTSKGPRDRRFRLSPHTAIQFYDVQDRLGHDRPSKAIDWLIEKSKAAIEALSGSEQPCQyyYDC 129 79*************************************************************7777744344 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MLQQRESKNE KEENGDYQHV QDLMATSKSA FKQQQVDNTR YGKIVRVHGG HIVRSMARKD 60 RHSNVYTSKG PRDRRFRLSP HTAIQFYDVQ DRLGHDRPSK AIDWLIEKSK AAIEALSGSE 120 QPCQYYYDCT NSNVLDPHQF WKKLENKASI SFGITRKAIG SWKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 2e-37 | TCP family protein |