PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP025068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 322aa MW: 36560.4 Da PI: 6.6544 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 7.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l +++k++G g+W+ +++ g++R++k+c++rw++yl PCP025068.1 14 RGAWTAHEDKVLTQYIKLHGEGRWRNLPKKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.8 | 4.5e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++Edel+++++k+lG++ W++Ia +++ gRt++++k++w++ PCP025068.1 67 RGNISPDEDELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MGRSPCCAKE GLNRGAWTAH EDKVLTQYIK LHGEGRWRNL PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEDELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVHDQQ 120 QQRSASNLKH HKNGEPNSKN AKSTDMASPS SLVYRTKAAK CTQVFINPQP HKVLLAHDHQ 180 HCTEETNTVL MFDDKPAAMD DDHINRALSF SSFSNINADQ ENSTSDFLVD FDIASLLNSD 240 FPEINHDYLN HNNSDNITSH FVDETAQFFS EEMLQHWNNG GSDDGDDQVQ VQPNLALNFH 300 SFTSFLGSDH QGEEWLGVGE SN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 3e-63 | MYB family protein |