PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025026.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 420aa    MW: 47084.2 Da    PI: 5.4608
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.32.5e-33141052102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+ye+++d+++++++sws++ +sf+v ++ +fa+++Lpk+Fkh+nf+SF+RQLn+YgF+k++ e+         weF+++ F +g+ +l+++i+
   PCP025026.1  14 FLSKTYEMVDDASTDSIVSWSASDKSFIVRNPPDFARDLLPKFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFIRGQPHLMKNIH 101
                   9********************999****************************************9998.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
   PCP025026.1 102 RRKP 105
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MEEAQGGTSS LPPFLSKTYE MVDDASTDSI VSWSASDKSF IVRNPPDFAR DLLPKFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFANDDFI RGQPHLMKNI HRRKPVHSHS LQNLQVQGQG  120
QGTSLSEAER QSMKDEIKSL KHEKERLAVE LQRHEQERHG LELQMQFLKD RLQHMEGQQQ  180
TMAAFVARVL QKPGIASNPV PQLEVRERKR RLPRTSWPFD DANNGNNQMV SSEAVSRENG  240
GLEKLEQLES FLTFWEDTIH DVGHNNIPLV DESTSGNEST AVSSMQLNVD IQSKSPQIDM  300
NSEPAAFVAP EPAASQSSME QTAGIAASAP TTALIQQPSN EKPAGTTSSA PTGVNDGFWE  360
QFLTENPGTS EAQKVPLERK DSDGRSNDSK PGDHGRLWCN IRNVNNLTEQ MGHLTPLEKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207212ERKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45710.11e-115HSF family protein