PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024931.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 731aa MW: 83599.2 Da PI: 6.8458

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024931.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.6	1.3e-20	53	146	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel PCP024931.1 53 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHELL 146 6*************9998874556679***************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK 60 QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR 120 IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSM STDDKSRICM FAKAGMSVRQ 180 MLRLMEMEKG VKLGCLPFTE IDVRNLLQSF RNVNRDNDAI DLIAMCKKMK DESPNFKYEF 240 KIDGHNRLEH IAWSYSSSVQ LYEEFGDSVV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG 300 CALLRDDNMQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAVAIEMPRS KHAFCIWHIV 360 AKFSDWFSVL LGPRYDDWKA EFHQLFNLDL VEDFEDRWRE MVNEYGLQAN KHVISLYALR 420 NFWALAYLRN YFFAGIMSTS QSESINAFIQ RFLSAQSQLD RFVEQAADVV DYNDRVGAKQ 480 KIERKLQRVC LKTGSPIESH AASVLTPYAF GKLQEELVSA PQYASLAVDE GCFQVRHHTE 540 ADGGCKVVWI PCQEHISCTC YQFEFSGILC RHVLRVLSTN NCFHIPNHYL PTRWCSVSSS 600 STNTFETATI TDNSEKIQLL ESMASTLITE SVETEERLNA GCEQIAMVLS RIKDLPRTTH 660 NAIDIAYNCP SDSLILPDVE DHGDGIVRFT IGNSHESVTL GKLKERRPRD MVEISKKRRH 720 CSGPCCLSVQ Q

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK  60
QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR  120
IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSM STDDKSRICM FAKAGMSVRQ  180
MLRLMEMEKG VKLGCLPFTE IDVRNLLQSF RNVNRDNDAI DLIAMCKKMK DESPNFKYEF  240
KIDGHNRLEH IAWSYSSSVQ LYEEFGDSVV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG  300
CALLRDDNMQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAVAIEMPRS KHAFCIWHIV  360
AKFSDWFSVL LGPRYDDWKA EFHQLFNLDL VEDFEDRWRE MVNEYGLQAN KHVISLYALR  420
NFWALAYLRN YFFAGIMSTS QSESINAFIQ RFLSAQSQLD RFVEQAADVV DYNDRVGAKQ  480
KIERKLQRVC LKTGSPIESH AASVLTPYAF GKLQEELVSA PQYASLAVDE GCFQVRHHTE  540
ADGGCKVVWI PCQEHISCTC YQFEFSGILC RHVLRVLSTN NCFHIPNHYL PTRWCSVSSS  600
STNTFETATI TDNSEKIQLL ESMASTLITE SVETEERLNA GCEQIAMVLS RIKDLPRTTH  660
NAIDIAYNCP SDSLILPDVE DHGDGIVRFT IGNSHESVTL GKLKERRPRD MVEISKKRRH  720
CSGPCCLSVQ Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein