PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024887.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 376aa MW: 41642.2 Da PI: 7.7936

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024887.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7e-32	211	266	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PCP024887.1 211 KQRRNWSPELHRRFLNALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 266 79****************************************************97 PP
2	Myb_DNA-binding	44.6	3.4e-14	213	264	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ PCP024887.1 213 RRNWSPELHRRFLNALQQLGGShaaTPKQIRELMKvDGLTNDEVKSHLQKYR 264 679***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MESTEEMQAS SKLGFREYVK ALEKEMHKIQ VFKRELPLCY ELVTHAIERC KQQVSDTTAD 60 YMHGQSECSQ QTSSEGHVFE EFIPLKRTSS SDTEDDEVHE SQEAKDNEKD DKIAGGDKKK 120 SDWLRSVQLW NTTPDAPLKE ELPRKALVME VNRNGGAFQP FQKEKDIGKT NVPVAKQPSS 180 AAATSSTTDT VSGGSGENKK KEEKDGQGQR KQRRNWSPEL HRRFLNALQQ LGGSHAATPK 240 QIRELMKVDG LTNDEVKSHL QKYRLHTRRP TPTMRGNNNA AQAPQFVVVG GIWMPPQDYA 300 AVAATTASGE AANNGIYAPV ASTPAVTQVS SPVQRLRLKQ PEPSHSDERV SHSEGRGHSN 360 STATSSSTHT HISPAF

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MESTEEMQAS SKLGFREYVK ALEKEMHKIQ VFKRELPLCY ELVTHAIERC KQQVSDTTAD  60
YMHGQSECSQ QTSSEGHVFE EFIPLKRTSS SDTEDDEVHE SQEAKDNEKD DKIAGGDKKK  120
SDWLRSVQLW NTTPDAPLKE ELPRKALVME VNRNGGAFQP FQKEKDIGKT NVPVAKQPSS  180
AAATSSTTDT VSGGSGENKK KEEKDGQGQR KQRRNWSPEL HRRFLNALQQ LGGSHAATPK  240
QIRELMKVDG LTNDEVKSHL QKYRLHTRRP TPTMRGNNNA AQAPQFVVVG GIWMPPQDYA  300
AVAATTASGE AANNGIYAPV ASTPAVTQVS SPVQRLRLKQ PEPSHSDERV SHSEGRGHSN  360
STATSSSTHT HISPAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-87	G2-like family protein