PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP024839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HSF | ||||||||
Protein Properties | Length: 243aa MW: 27847.4 Da PI: 7.8211 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111.4 | 6.3e-35 | 23 | 114 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++ weF +++F+kg+k++l++i+ PCP024839.1 23 FLLKTYMLVEDPATDDVISWNDDGSAFVVWQTAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDKFRKGEKDQLCDIR 110 9****************************************************************999.........******************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PCP024839.1 111 RRKA 114 *985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEGVCDDQKR LLEYVRKSSP PPFLLKTYML VEDPATDDVI SWNDDGSAFV VWQTAEFARD 60 LLPTLFKHSN FSSFVRQLNT YGFRKVATNR WEFCNDKFRK GEKDQLCDIR RRKAWATKQQ 120 PINNAVTQQA GAAVLLPNEF DEDQRSSSTS SSSEFSSLVD ENKRLKQENG VLSSELTSMK 180 RKCKELLDLV AKYGDSAEKE EEDNERVLKL FGVRLEVTGE RERKRKRAEI SATANVLLSQ 240 ACK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 4e-68 | HSF family protein |