PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024462.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 308aa MW: 34899.3 Da PI: 6.7973

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024462.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.5	9.2e-08	257	290	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + PCP024462.1 257 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 290 469*****************************87 PP
2	ELK	25.4	3.2e-09	211	232	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ PCP024462.1 211 ELKIELKQGFKSRIEDVREEIL 232 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MQESGLGMMG GGGIDGHHDQ HNRQLKAEIA THPLYEQLLS AHVSCLRVAT PIDQLPLIDA 60 QLSQSHHLLR SYASQQQHGH SVSPHERQEL DNFLAQYLIV LCSFKEQLQQ HVRVHAVEAV 120 MACREIESNL QALTAINDQL FWGSGSLSAV LVRSGCGVSL GEGSGATMSD DEDDMQMDFP 180 MDQSGAEGHD MMGFGLPTES ERSLMERVRQ ELKIELKQGF KSRIEDVREE ILRKRRAGKL 240 PGDTTTVLKN WWQQHSKWPY PTEDDKAKLV EETGLQLKQI NNWFINQRKR NWHSNSQSVT 300 SLKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	288	308	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-162	TALE family protein