PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024433.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 723aa MW: 78680.7 Da PI: 7.9859

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024433.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.3	4e-15	468	505	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+YC+Cfaag +C e C+C++C+Nk PCP024433.1 468 CKRCNCKRSKCLKLYCDCFAAGLYCIEPCSCQECFNKP 505 79**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MDTPLKNNQT TPTTPLPAKY EDSPVFNYIS NLSPIEPVKS AGNDHHTFNS LAFASLPSIF 60 ASPQNLSIPE TRFVLRRHHF SDSPRPNSFQ GGNPNSKSDG VPVSVEQSYL GADQPECFAS 120 GSSSDVEVAS AVPTESMELP VEFLNNLKYG SGSPHSNDVH HSKGRHSFFE RETHLRRIHR 180 IEQKKGDLVR LISDDQLKFD STIIKENCAG HDPTPVDPGD ISFMSNILRD NDIEVKEFSG 240 IIDSSEQCRS GKVSNQPEGI GRTKETDETP AILSRTLLDK LNVNDPSGIV DEKSPKCIHS 300 SCKPSSQSYA IRRRCLDFER PATHKRKSID ASGGSSASLK SSCEVASVEK QLVQTIKGCD 360 YSSSRLPGIG LHLNALATTI ESNLSTVVKH EVHASEIQGI NLPNSKISST SLTPSEVSCD 420 ESCKNKAQVA VTSPQICAPV GQEPDHSSPE KKRHAPLKLQ PVGESLACKR CNCKRSKCLK 480 LYCDCFAAGL YCIEPCSCQE CFNKPMYENI VLENRKLIES RNPLAFAPKV IARAVAIPQR 540 KLTRLRLQLG IKGDAIVENQ GGAGCGILCR CVGCKNTFGR KDEAEQGEVG GDESVDPRKD 600 AVNVNLPTVR DQDLLMAPSG ICRPPPGQLT SSSNGRPKIF SLHSVLSSSQ HEKHLQAIPE 660 DVTPETLASS CSQPSGLKST SPNSKRVSPP YSSSEFGSAW RGGRKLVLRS IPPFPTLESP 720 RKR

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MDTPLKNNQT TPTTPLPAKY EDSPVFNYIS NLSPIEPVKS AGNDHHTFNS LAFASLPSIF  60
ASPQNLSIPE TRFVLRRHHF SDSPRPNSFQ GGNPNSKSDG VPVSVEQSYL GADQPECFAS  120
GSSSDVEVAS AVPTESMELP VEFLNNLKYG SGSPHSNDVH HSKGRHSFFE RETHLRRIHR  180
IEQKKGDLVR LISDDQLKFD STIIKENCAG HDPTPVDPGD ISFMSNILRD NDIEVKEFSG  240
IIDSSEQCRS GKVSNQPEGI GRTKETDETP AILSRTLLDK LNVNDPSGIV DEKSPKCIHS  300
SCKPSSQSYA IRRRCLDFER PATHKRKSID ASGGSSASLK SSCEVASVEK QLVQTIKGCD  360
YSSSRLPGIG LHLNALATTI ESNLSTVVKH EVHASEIQGI NLPNSKISST SLTPSEVSCD  420
ESCKNKAQVA VTSPQICAPV GQEPDHSSPE KKRHAPLKLQ PVGESLACKR CNCKRSKCLK  480
LYCDCFAAGL YCIEPCSCQE CFNKPMYENI VLENRKLIES RNPLAFAPKV IARAVAIPQR  540
KLTRLRLQLG IKGDAIVENQ GGAGCGILCR CVGCKNTFGR KDEAEQGEVG GDESVDPRKD  600
AVNVNLPTVR DQDLLMAPSG ICRPPPGQLT SSSNGRPKIF SLHSVLSSSQ HEKHLQAIPE  660
DVTPETLASS CSQPSGLKST SPNSKRVSPP YSSSEFGSAW RGGRKLVLRS IPPFPTLESP  720
RKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	8e-64	CPP family protein