PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024351.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 326aa    MW: 35789.6 Da    PI: 7.061
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024351.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.21.7e-33171228259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+
  PCP024351.1 171 EDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCGVKKRVERSYEDPSTVITTYEGQHNHP 228
                  8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MSDQEPKDLY YHDLFQYEDH DGGMVSINNH PNLQGFDVNP SYMNLTECLK GSMDYNSLAT  60
AFGLSSSTSE ALFSSIEGDQ KPANHLGYSG GGGGGDVTPL TPNSSMSSSS AEVGADEDCG  120
KNKKDRQPKG SSEDGGDSSK KVSKLAKNKG EKKQREPRFA FMTKSEVDHL EDGYRWRKYG  180
QKAVKNSPYP RSYYRCTTPK CGVKKRVERS YEDPSTVITT YEGQHNHPLP ATLRGNAAAA  240
LFPPSMLNLA PATRTFSTLA AGGPSSAFSQ EFLFQMPQYM ISNNANQGSS RNPNYHLQQH  300
QLPHGAADQY GLLQDLVPSM FLKQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-58WRKY family protein