PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024321.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 520aa MW: 57836.2 Da PI: 7.5964

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024321.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.8	2.3e-33	221	278	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg+nWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d+++++i+Y+g+Hnh+k PCP024321.1 221 DDGFNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITQIVYKGSHNHPK 278 8**************************************.*************85 PP
2	WRKY	106	2e-33	385	443	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k+ver+++d+++v++tYeg+Hnh+ PCP024321.1 385 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCPVRKHVERASHDTRAVITTYEGKHNHD 443 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MTSSFTNLLK SNMENNGIGQ DRTNWGGQFS DYSSNPNRFT DRNETEIPKF RSLQPPSLPL 60 SPPPVSPSSY LASTPAFSPT DFLSSPMFLS SSNNLESPTT GAFSSQVFDW MNNTKDTQQG 120 IRESESKMFS DFSFQPESRP ATNLQSSSSM VSVEEPFKRE RQAWDFSTTR QADSSAEKTG 180 VKSEFEPMEA NTQSNGLNGA PKSDYLHSTQ SSQYAREQKS DDGFNWRKYG QKQVKGSENP 240 RSYYKCTFPN CPTKKKVERS LDGQITQIVY KGSHNHPKPQ STRRSSSNLI QGSSYVISDQ 300 SVPTLSNPKV ESITLQEESS TSMGEDEFEQ NSPISNSGGA EDENEPEAKR LKGENANDQA 360 YVSSGSRIVK EPRIVVQTTS EIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTSVGCPVRK 420 HVERASHDTR AVITTYEGKH NHDVPAARGS SNNSNASRPA ADNSSNNVSM AVRPLALPNH 480 SNLRYLNSLQ NTRQPATTES QPPYTLKMLQ SEGSYGFSEF

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MTSSFTNLLK SNMENNGIGQ DRTNWGGQFS DYSSNPNRFT DRNETEIPKF RSLQPPSLPL  60
SPPPVSPSSY LASTPAFSPT DFLSSPMFLS SSNNLESPTT GAFSSQVFDW MNNTKDTQQG  120
IRESESKMFS DFSFQPESRP ATNLQSSSSM VSVEEPFKRE RQAWDFSTTR QADSSAEKTG  180
VKSEFEPMEA NTQSNGLNGA PKSDYLHSTQ SSQYAREQKS DDGFNWRKYG QKQVKGSENP  240
RSYYKCTFPN CPTKKKVERS LDGQITQIVY KGSHNHPKPQ STRRSSSNLI QGSSYVISDQ  300
SVPTLSNPKV ESITLQEESS TSMGEDEFEQ NSPISNSGGA EDENEPEAKR LKGENANDQA  360
YVSSGSRIVK EPRIVVQTTS EIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTSVGCPVRK  420
HVERASHDTR AVITTYEGKH NHDVPAARGS SNNSNASRPA ADNSSNNVSM AVRPLALPNH  480
SNLRYLNSLQ NTRQPATTES QPPYTLKMLQ SEGSYGFSEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-113	WRKY family protein