PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024177.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 440aa MW: 49929.9 Da PI: 5.4563

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024177.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.8	5.5e-36	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++ ++++swse+g+sfvv+d++efak++Lp yFkh+nf+SFvRQLn+YgF+k++ e+ weF++++F +g ++ll++i+ PCP024177.1 15 FLTKTYDLVDDPSSNHMVSWSESGSSFVVWDPTEFAKEMLPMYFKHNNFSSFVRQLNTYGFRKIDPEQ---------WEFANEEFLRGGRHLLKNIH 102 9*************************************************************9998.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PCP024177.1 103 RRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEGSQGGSGG APAPFLTKTY DLVDDPSSNH MVSWSESGSS FVVWDPTEFA KEMLPMYFKH 60 NNFSSFVRQL NTYGFRKIDP EQWEFANEEF LRGGRHLLKN IHRRKPIHSH SMQNHEYTVA 120 LRDTEREEYE KKISRLNHDK SLLELELQRH QRENQEFEFQ VQILREQLQN MENRQKQYTA 180 FLAQLVQKPG FASVLVQQSE IHSKKRRLLN SNHFPDDFGM EGLNLNPQKE NLGSISTPII 240 KLDQLEKMES SLNFWEDFVH GIGEAMPEDV NDICPLSQAS PIIVTEIQDT SMNSRPCSPR 300 SHLSSPNSMN AHSFPEVAAG SANILDILAI TSMCPTVDFR SKSSRIDMNS KPDSAPALAK 360 EMVVELEVKN AAPTKANDVF WEQCLTETPG LADAPEVLSE RRDGDGKARD ANPAILKKHW 420 WNTDNVDNFT NQIGCPTPAT

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEGSQGGSGG APAPFLTKTY DLVDDPSSNH MVSWSESGSS FVVWDPTEFA KEMLPMYFKH  60
NNFSSFVRQL NTYGFRKIDP EQWEFANEEF LRGGRHLLKN IHRRKPIHSH SMQNHEYTVA  120
LRDTEREEYE KKISRLNHDK SLLELELQRH QRENQEFEFQ VQILREQLQN MENRQKQYTA  180
FLAQLVQKPG FASVLVQQSE IHSKKRRLLN SNHFPDDFGM EGLNLNPQKE NLGSISTPII  240
KLDQLEKMES SLNFWEDFVH GIGEAMPEDV NDICPLSQAS PIIVTEIQDT SMNSRPCSPR  300
SHLSSPNSMN AHSFPEVAAG SANILDILAI TSMCPTVDFR SKSSRIDMNS KPDSAPALAK  360
EMVVELEVKN AAPTKANDVF WEQCLTETPG LADAPEVLSE RRDGDGKARD ANPAILKKHW  420
WNTDNVDNFT NQIGCPTPAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	4e-78	HSF family protein