PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024136.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 294aa    MW: 32673.7 Da    PI: 5.9886
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024136.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.24e-36101002101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y +++d++l+++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+kell++i+
   PCP024136.1  10 FLTKTYLLVDDPSLDDVISWNESGTTFVVWKTLDFARDLLPKYFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANENFQRGQKELLSEIR 97 
                   9***************************************************************9999.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
   PCP024136.1  98 RRK 100
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAQRSVPAPF LTKTYLLVDD PSLDDVISWN ESGTTFVVWK TLDFARDLLP KYFKHNNFSS  60
FVRQLNTYGF RKTVPDKWEF ANENFQRGQK ELLSEIRRRK PVTSTAAQAA LGEKSGGPST  120
PSNSGEELAS TSTSLPDSKN PGSVETATLS QVADLSDENK KLKRENENLN SELAQTKKQC  180
DELVGFLVEY VKMGPEQINR IIGRGSYGPT RDDFEPDDRG LALDMDGGDD DEEEKEGLKL  240
FGVWVKGDEK MKGKKMGRDE KFGVCGVGGV PRAKRMKGGV DFHAPMMRSG KVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.11e-77HSF family protein