PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024111.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 380aa MW: 41765.1 Da PI: 6.2839

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024111.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.2	3.8e-33	254	309	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 kpr++W+peLH+rFv+a++qLGG+e+AtPk+i+elm+v+gLt+++vkSHLQkYRl+ PCP024111.1 254 KPRRCWSPELHRRFVDALQQLGGTEVATPKQIRELMQVEGLTNDEVKSHLQKYRLH 309 79****************************************************97 PP
2	Myb_DNA-binding	48.6	1.9e-15	256	307	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I + m+ +g+t ++ks++qky+ PCP024111.1 256 RRCWSPELHRRFVDALQQLGGTevaTPKQIRELMQvEGLTNDEVKSHLQKYR 307 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MELLSLDSSP LFVPKTITDF LAQLAAIKDG SQRSSELDGY VKRLEDELRK IEVFKRELPL 60 CMLLLKDAIE RLKEEGMRWR RMDERPVVEE FMPLKGNSEE DGGVVSGKEN IDKKNWMSSA 120 QLWNTSINVF DYTKHDSVEL KLGNEADDRS VPENPIVVSN NRAVEGALLA FRGQNELSGF 180 AKPCLKEDKE VSEVPNLCLM TPLMSEALAG YANANSKTSN GCKGGGSGSG VAGQVKLLNK 240 PQPQPQQQQQ SLRKPRRCWS PELHRRFVDA LQQLGGTEVA TPKQIRELMQ VEGLTNDEVK 300 SHLQKYRLHI RKLPPSAAAG QGNALLMSLD HSGDHSKANN VQSGSPQGPL LAGGYAKGRS 360 TTGGESGNSR EAEEDEKSDG

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MELLSLDSSP LFVPKTITDF LAQLAAIKDG SQRSSELDGY VKRLEDELRK IEVFKRELPL  60
CMLLLKDAIE RLKEEGMRWR RMDERPVVEE FMPLKGNSEE DGGVVSGKEN IDKKNWMSSA  120
QLWNTSINVF DYTKHDSVEL KLGNEADDRS VPENPIVVSN NRAVEGALLA FRGQNELSGF  180
AKPCLKEDKE VSEVPNLCLM TPLMSEALAG YANANSKTSN GCKGGGSGSG VAGQVKLLNK  240
PQPQPQQQQQ SLRKPRRCWS PELHRRFVDA LQQLGGTEVA TPKQIRELMQ VEGLTNDEVK  300
SHLQKYRLHI RKLPPSAAAG QGNALLMSLD HSGDHSKANN VQSGSPQGPL LAGGYAKGRS  360
TTGGESGNSR EAEEDEKSDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	4e-58	G2-like family protein