PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023936.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 332aa MW: 36031.4 Da PI: 7.4792

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023936.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00091	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PCP023936.1 143 YQCKTCDRCFPSFQALGGHRASH 165 9***********99999998887 PP
2	zf-C2H2	12.4	0.00046	235	257	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F++ L H+r+H PCP023936.1 235 HECSVCGAEFTSGQALGGHMRRH 257 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MMMMMEAADH QDQDEAVLGY KDQAQMMIIK GKRTKRQRLA SPLSAIATTA SSSSSVGYDH 60 DHLQHEGLVG PRPRDSTDVV GPTASPASSA DQFTEISTEE EEDMANCLIL LAQGNSIPKA 120 QNPSLVNNNK AASAAASTGL CLYQCKTCDR CFPSFQALGG HRASHKKPGK QVNINSTTQE 180 NKKALSFVEE AEEFDRFNNT STMLSLQISN TAFRALSSAT SPCYNNNNNK ANKVHECSVC 240 GAEFTSGQAL GGHMRRHRTF INTAATTTAV ATMSSPPQSQ SGSKRPRNVL QLDLNLPAPE 300 EERLQETNKF PFGPKKEQVI IFSACPLVGC HY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	1e-50	C2H2 family protein