PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023516.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 351aa    MW: 39273.5 Da    PI: 6.2423
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023516.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.11.8e-28130190259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+v+eitY+g+H+++
  PCP023516.1 130 EDGHSWRKYGQKDILGAKHPRSYYRCTYRntqNCWATKQVQRSDEDPTVFEITYKGKHTCS 190
                  8***************************98899**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDSGKSGEQK SLVNEIIEGM ELAKQLRLCL NAKSSADTKQ FLVQRILSSY EKALLMLKCG  60
GSPQSPIRAI ASAPESLMSA NEGPCCVDNN SNLQDHQDLT AVSKKRKEMA KWTEHVTRVI  120
SENGIEGPHE DGHSWRKYGQ KDILGAKHPR SYYRCTYRNT QNCWATKQVQ RSDEDPTVFE  180
ITYKGKHTCS HGGSSVPPPP SPEKQERKRH NHNNTYQQQQ SQGNQMSFPT NLRVNTENLD  240
DRENTASPFS FTSSPFGSIS DDAFLSSMLD DKSLFDNFNQ SFLSPAAGGS NYYFALPSQM  300
RNIAGYEQRS ESDIISANNS STNSPIPDMD FPLQPVELDP YFPFDSPGFF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-57WRKY family protein