PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023376.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 505aa MW: 57088.1 Da PI: 7.8746

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023376.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.5	4.8e-28	133	221	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GF +r++ +++sk++g+++ rt+vC+keg+r++++++ +k+ ++r++tr+gC+a+l +kk + g+w+v+ +++eH+H+l+p PCP023376.1 133 FYNAYATRMGFVTRMNDMYRSKHDGTVIGRTLVCNKEGFRKPDRRD-KKTLKPRTQTRVGCRAMLSIKKLSVGNWVVKWFVKEHTHALTP 221 9****************************************999.99************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MNHPGWSHGL PGSASYPPCS LSNLRLKEAT AQNCSRVEQN ANRADAGEEF ETTADAHACI 60 LQSVLRSKKR FQNAESDGAS VGTSLVDMSH LFGQDHDDDQ RTRNSCKDGS SLVQPHEPYV 120 GQEFDSQESA LAFYNAYATR MGFVTRMNDM YRSKHDGTVI GRTLVCNKEG FRKPDRRDKK 180 TLKPRTQTRV GCRAMLSIKK LSVGNWVVKW FVKEHTHALT PNKAPKGLID DQVLDDKTKI 240 AELTNELFLE RKRSAALREI VDLLFNHIEE HTQDLSKKLQ HVVDNVKELE SEGKNCHGKS 300 KDLLTMKQNE DEWLEYHTVM QDVIKRSRLD KTLFFDLRGN HDNFGVPQLG GSFDFFSKYS 360 ISGHLGRSRN VNSVTLQTAD RKHLFVGVDS TMPVGLRGPT NLFAHPTDQL LAQLDTHLSQ 420 WDSRSQEPLS KISFGHFPLS FSQWDSQFMS TSSTHHDYEC HDMVPLSYGT VRALVFSVSP 480 IASVTTKIYD SRPGFSIWSL RHPCT

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MNHPGWSHGL PGSASYPPCS LSNLRLKEAT AQNCSRVEQN ANRADAGEEF ETTADAHACI  60
LQSVLRSKKR FQNAESDGAS VGTSLVDMSH LFGQDHDDDQ RTRNSCKDGS SLVQPHEPYV  120
GQEFDSQESA LAFYNAYATR MGFVTRMNDM YRSKHDGTVI GRTLVCNKEG FRKPDRRDKK  180
TLKPRTQTRV GCRAMLSIKK LSVGNWVVKW FVKEHTHALT PNKAPKGLID DQVLDDKTKI  240
AELTNELFLE RKRSAALREI VDLLFNHIEE HTQDLSKKLQ HVVDNVKELE SEGKNCHGKS  300
KDLLTMKQNE DEWLEYHTVM QDVIKRSRLD KTLFFDLRGN HDNFGVPQLG GSFDFFSKYS  360
ISGHLGRSRN VNSVTLQTAD RKHLFVGVDS TMPVGLRGPT NLFAHPTDQL LAQLDTHLSQ  420
WDSRSQEPLS KISFGHFPLS FSQWDSQFMS TSSTHHDYEC HDMVPLSYGT VRALVFSVSP  480
IASVTTKIYD SRPGFSIWSL RHPCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-63	FAR1 family protein