PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023161.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 464aa MW: 52381.2 Da PI: 6.6347

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023161.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.2	1.7e-14	108	186	2	86
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +kv++ps v+ l l kkf++e++ k ++ +++lede+g+++ k+ ++k++ l++GW++F +++ gD+v+F+l+ PCP023161.1 108 LKVMMPSEVSGGFYLNLAKKFCSEYMPK--QDSMIVLEDENGKEFGTKYLVEKGG----LSGGWRGFSITHKIMKGDVVIFHLVT 186 69*********************844..6669***********666666....9********************864 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEEAMVILQD QKQSSSYPLL QPPPQPPPHK GMKTKKQFGQ KPPCFQPTTT SNVLNANANP 60 MMFKCRKRKA PVRVTVESLY DSSQAQSSVL EKAKKIEASL DHKFPSLLKV MMPSEVSGGF 120 YLNLAKKFCS EYMPKQDSMI VLEDENGKEF GTKYLVEKGG LSGGWRGFSI THKIMKGDVV 180 IFHLVTPFKF KKIDLGDATM VVKMMKMFIL WYKEKGQDKL VYIIRSNEVN WSLPLMRVDP 240 PIRQMDTGGF TACGKEEREN LEPNPQENAI VYYTDSGPTS DQSGNDGEDV GSEFLDGLRL 300 SESVVTFKEV HCLDNFNVQV NGLIINSEFS KYVLTKYYEL CRSQNSFLHE QLLEGLNSKL 360 IAGVISETVN IADAIRACKI TTPEDYLSTW DKTLKAFGDL GMNVHFLRAR LDQLTSLASK 420 SKRLEANVLE VKEAMNSLDS EIETPNTSLE EREILFQEMA KAPW

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEEAMVILQD QKQSSSYPLL QPPPQPPPHK GMKTKKQFGQ KPPCFQPTTT SNVLNANANP  60
MMFKCRKRKA PVRVTVESLY DSSQAQSSVL EKAKKIEASL DHKFPSLLKV MMPSEVSGGF  120
YLNLAKKFCS EYMPKQDSMI VLEDENGKEF GTKYLVEKGG LSGGWRGFSI THKIMKGDVV  180
IFHLVTPFKF KKIDLGDATM VVKMMKMFIL WYKEKGQDKL VYIIRSNEVN WSLPLMRVDP  240
PIRQMDTGGF TACGKEEREN LEPNPQENAI VYYTDSGPTS DQSGNDGEDV GSEFLDGLRL  300
SESVVTFKEV HCLDNFNVQV NGLIINSEFS KYVLTKYYEL CRSQNSFLHE QLLEGLNSKL  360
IAGVISETVN IADAIRACKI TTPEDYLSTW DKTLKAFGDL GMNVHFLRAR LDQLTSLASK  420
SKRLEANVLE VKEAMNSLDS EIETPNTSLE EREILFQEMA KAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	94	RKRKAPVRVTVESLYDSSQAQSSVLEKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-31	B3 family protein