PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023160.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 416aa MW: 46626.6 Da PI: 7.1689

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023160.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.2	5.4e-17	69	158	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +kv++ps+v +l l+kkf+ +h+ +++kt++lede+g ++e k+ ++ + l++GW++F a +L+egD v+F+l+ s+f +v ++r+ PCP023160.1 69 LKVMLPSHVAGCFWLGLSKKFCFDHMP--KQDKTIVLEDENGDKFETKY--LAQK--VGLSGGWRGFSIARKLQEGDAVIFHLVTPSKF--KVYIIRS 158 699*****************99974..4889************..5554..56*********************9987888..8888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MAMAVLQDQK QKQSSSCPPP PKIQVVSCSN ANPNMPESRK RKRVTVAKSV YERAKEVEAT 60 LDPKFPILLK VMLPSHVAGC FWLGLSKKFC FDHMPKQDKT IVLEDENGDK FETKYLAQKV 120 GLSGGWRGFS IARKLQEGDA VIFHLVTPSK FKVYIIRSND LDGMDCNIDP LKLDASIKLA 180 DTGDVITRER EERENMETIP KDTAIAFASK SGSISDHSGN DSEDRGFKVL DGLQLSESNV 240 AFKEVKSMEN FNVLVNGLNI NSEFSKHLLI KYYDLCCSQN SFLHELLLKG LNCKLISGAI 300 SETINIADAI RSCSVTTLEG NFTTWYKTLK AFEGLGMNVG FLHTRLNQLV SLASRSKRFK 360 EARLEKDQAE EEMRSLEAKL LAVKDAINML DSEIESLNTS LEKLEHMFQE VAKAPW

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MAMAVLQDQK QKQSSSCPPP PKIQVVSCSN ANPNMPESRK RKRVTVAKSV YERAKEVEAT  60
LDPKFPILLK VMLPSHVAGC FWLGLSKKFC FDHMPKQDKT IVLEDENGDK FETKYLAQKV  120
GLSGGWRGFS IARKLQEGDA VIFHLVTPSK FKVYIIRSND LDGMDCNIDP LKLDASIKLA  180
DTGDVITRER EERENMETIP KDTAIAFASK SGSISDHSGN DSEDRGFKVL DGLQLSESNV  240
AFKEVKSMEN FNVLVNGLNI NSEFSKHLLI KYYDLCCSQN SFLHELLLKG LNCKLISGAI  300
SETINIADAI RSCSVTTLEG NFTTWYKTLK AFEGLGMNVG FLHTRLNQLV SLASRSKRFK  360
EARLEKDQAE EEMRSLEAKL LAVKDAINML DSEIESLNTS LEKLEHMFQE VAKAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-37	B3 family protein