PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023083.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 368aa MW: 41181.5 Da PI: 8.4883

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023083.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	37	91	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl PCP023083.1 37 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 91 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.5e-23	39	90	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ PCP023083.1 39 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 90 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MFQHHHQHHK KPSTMNSHDR PMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP 60 DKATPKTIMR VMGVKGLTLY HLKSHLQKFR LGKQPHKEFN DHSIKDHASP LDLQRNSASS 120 PAIINRSMNE MQMEVQRRLH EQLEVQKHLQ LRIEAQGKYM QSILEKACQT LAGENNMAAA 180 AGSYKGNIGN QSVNPTDMGS LKDFNSPLNF PSFQDLNIYG GDHLDLQQNL DRPPLDHCFM 240 PNNDNNICLG PKKRPSPYSG SGKSPLIWSD DLRLQDLGTA ASCLGPQDDP FKSSDSIQIA 300 PPSIERGSEI DSISDIYESK PMLQGDDKKF DSANKLERPS PRRAPLGSDR MNPMINTGVR 360 QGRNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MFQHHHQHHK KPSTMNSHDR PMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP  60
DKATPKTIMR VMGVKGLTLY HLKSHLQKFR LGKQPHKEFN DHSIKDHASP LDLQRNSASS  120
PAIINRSMNE MQMEVQRRLH EQLEVQKHLQ LRIEAQGKYM QSILEKACQT LAGENNMAAA  180
AGSYKGNIGN QSVNPTDMGS LKDFNSPLNF PSFQDLNIYG GDHLDLQQNL DRPPLDHCFM  240
PNNDNNICLG PKKRPSPYSG SGKSPLIWSD DLRLQDLGTA ASCLGPQDDP FKSSDSIQIA  300
PPSIERGSEI DSISDIYESK PMLQGDDKKF DSANKLERPS PRRAPLGSDR MNPMINTGVR  360
QGRNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-124	G2-like family protein