PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022962.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 481aa MW: 52633.7 Da PI: 6.9416

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022962.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	79.7	3.2e-25	165	221	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ ++v+ei+Y+++H+h+ PCP022962.1 165 SDGYNWRKYGQKQVKSPQGSRSYYRCTFSECYAKK-IECCDHSGHVIEIVYKSQHTHD 221 7******************************98.*******************7 PP
2	WRKY	98.1	5.7e-31	344	400	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+ PCP022962.1 344 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKQIETAVDNSSAVIITYKGVHDHD 400 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MAEHRESSHA LPAEKLQPRK QEQKEGGDGD EGDDEEGKQR LGEFQPGELE SSVSELRQTQ 60 LETPTAPSTL EVSENDQFAG MQLDSVSQSI DGAELQEKLG LSHQEILASV TNQDIKTPKQ 120 SRTQLTVYPT PFSELSPTSV TQSISSAPSP IPLERRVPHG KTSASDGYNW RKYGQKQVKS 180 PQGSRSYYRC TFSECYAKKI ECCDHSGHVI EIVYKSQHTH DPPLKSICIK ESKLALSAEC 240 VRYSVAAAEH SCRIVNDSEL STSSKEPIQE TPSIPERKRQ SSSDSDDNGD VKIKEEHGDG 300 DEPEPKRRQV MKKSNSEYSA SLSKPGKKPK LVVHAAGDVG ISGDGYRWRK YGQKMVKGNP 360 HPRNYYRCTS AGCPVRKQIE TAVDNSSAVI ITYKGVHDHD MPVPKKRHGP PSAPLVAAAA 420 PASMNNLHIK KTDTVPKPIS STQCSVDTGG ELTGEALDLG GEKAMESART LLSIGFELKP 480 C

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MAEHRESSHA LPAEKLQPRK QEQKEGGDGD EGDDEEGKQR LGEFQPGELE SSVSELRQTQ  60
LETPTAPSTL EVSENDQFAG MQLDSVSQSI DGAELQEKLG LSHQEILASV TNQDIKTPKQ  120
SRTQLTVYPT PFSELSPTSV TQSISSAPSP IPLERRVPHG KTSASDGYNW RKYGQKQVKS  180
PQGSRSYYRC TFSECYAKKI ECCDHSGHVI EIVYKSQHTH DPPLKSICIK ESKLALSAEC  240
VRYSVAAAEH SCRIVNDSEL STSSKEPIQE TPSIPERKRQ SSSDSDDNGD VKIKEEHGDG  300
DEPEPKRRQV MKKSNSEYSA SLSKPGKKPK LVVHAAGDVG ISGDGYRWRK YGQKMVKGNP  360
HPRNYYRCTS AGCPVRKQIE TAVDNSSAVI ITYKGVHDHD MPVPKKRHGP PSAPLVAAAA  420
PASMNNLHIK KTDTVPKPIS STQCSVDTGG ELTGEALDLG GEKAMESART LLSIGFELKP  480
C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-120	WRKY family protein