PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022726.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 368aa MW: 41538.4 Da PI: 5.3787

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022726.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.7	1.2e-14	77	174	1	96
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+l +sdv ++gr+v+pk+ ae+h +ke++ l l d ++W+v++ + + +s++y+l +++F +a+gL +gD++++ d+ + ++++ PCP022726.1 77 FQKKLQNSDVKANGRIVVPKREAESHfpvLVSKERGLWLHLDDmDYMQVWTVRF-WpNERSRMYILD-HTRSFIQAHGLGAGDTITLFKDD-RLGSYL 171 99************************9445668889999996666***.535555555555.9**************976333.445455 PP EEE CS B3 94 vkv 96 +++ PCP022726.1 172 IRA 174 555 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MAGVHEKNNV AASAAEDNLA GSSRSSGPLR SENSYRRNPR DEPLVHEPAA RQPPVLTCPP 60 PTPDPRLFNP QQMRFLFQKK LQNSDVKANG RIVVPKREAE SHFPVLVSKE RGLWLHLDDM 120 DYMQVWTVRF WPNERSRMYI LDHTRSFIQA HGLGAGDTIT LFKDDRLGSY LIRARRDAIR 180 LLAHPTTHNP VQLPQRLPCD PLQDFGVNLF VVPRVLEYNH QTIENIAVNI GVMDASPSTN 240 NQFSVQAEED QRTTVHEHNN VEVAVAPVVE DRQTTVNENN DVGTAVVTED HQTMMINVNN 300 YVSDNVNVAN EMVFPSLDDH SSFKLPSLSP LFGSDISRSS YELGNPIDDF WDVGMGQMDF 360 DFNFSSPK

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MAGVHEKNNV AASAAEDNLA GSSRSSGPLR SENSYRRNPR DEPLVHEPAA RQPPVLTCPP  60
PTPDPRLFNP QQMRFLFQKK LQNSDVKANG RIVVPKREAE SHFPVLVSKE RGLWLHLDDM  120
DYMQVWTVRF WPNERSRMYI LDHTRSFIQA HGLGAGDTIT LFKDDRLGSY LIRARRDAIR  180
LLAHPTTHNP VQLPQRLPCD PLQDFGVNLF VVPRVLEYNH QTIENIAVNI GVMDASPSTN  240
NQFSVQAEED QRTTVHEHNN VEVAVAPVVE DRQTTVNENN DVGTAVVTED HQTMMINVNN  300
YVSDNVNVAN EMVFPSLDDH SSFKLPSLSP LFGSDISRSS YELGNPIDDF WDVGMGQMDF  360
DFNFSSPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	1e-27	B3 family protein