PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022683.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 323aa    MW: 35982.2 Da    PI: 6.9284
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022683.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3598.4e-19126227199
                  EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                  f+k+l++sdv+ ++r++lpkk ae+h   ++++e++ + + d +g  +W++k+++  +++s++yvl+ ++ +Fv+ +gL+ gD ++ +   + +++++
  PCP022683.1 126 FQKELKNSDVSPLRRMILPKKAAEAHlpTLESKEGMAINMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGDFVNVHGLQFGDYIMVYQ--DnHNQNY 220
                  99**************************6777799**********9*******9989999999***9.******************993..3388888 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  v++++++
  PCP022683.1 221 VIQARKA 227
                  9888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDQTAAAAAA VGLREKTEAS GLRAGVGAEL GLVTAKGNKD NADHKSTFHG SNRSGSIHDL  60
VRAVTSFGVL RKKRMTRQRR SSTINFHDLP SFAAAAASST PSHVLPPPST LPPGRVIDPT  120
RLRFLFQKEL KNSDVSPLRR MILPKKAAEA HLPTLESKEG MAINMDDIDG LHVWSFKYRF  180
WPNNNSRMYV LENTGDFVNV HGLQFGDYIM VYQDNHNQNY VIQARKASDQ DHVYGDISGM  240
NNAVNDRYMQ ESEANKFSSS SFYMPKMEED MTAGMSFVYD TTTFSNDSLL DFFGGSMMTN  300
YSRNGSLHES FGSVENLSLD DFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.14e-90B3 family protein