PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022611.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family TALE
Protein Properties Length: 982aa    MW: 109129 Da    PI: 6.3397
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022611.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.41.1e-084104422254
                  SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                   +yp+ +e+  LA+++gLt +qV +WF N R +
  PCP022611.1 410 LPYPKDSEKIMLARQTGLTRNQVANWFINARVR 442
                  69*****************************88 PP
2Homeobox27.26.8e-099059421954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  PCP022611.1 905 FEHflHPYPNDNEKLLLASQTGLSKNQVSNWFINARVR 942
                  554459******************************88 PP
3BELL118.33.6e-38268339172
         BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  erq+lq+kk+kLls+l+eVd+rYkqy++q+q+v+s F+ vag g+a pYt+lAl+aiSrhFr+L+dai++qi
  PCP022611.1 268 ERQDLQNKKTKLLSMLNEVDQRYKQYYHQMQAVVSYFDKVAGNGAAGPYTALALQAISRHFRSLRDAIKGQI 339
                  799*******************************************************************98 PP
4BELL971.6e-31768838272
         BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  ++e+q++ a L++lle+V++r ++y++q+++v+ssFe+v+g g+ak+Yt+lAlka+SrhF +L+d i+++i
  PCP022611.1 768 KHEMQARLANLITLLEQVEDRCEKYYHQMEQVMSSFEMVVGEGAAKSYTALALKAMSRHFCSLRDGIVSHI 838
                  79******************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 982 aa     Download sequence    
MATYFQNLGN QNLLNPYQGD PEPPGNMMMY LNQASYAAGS YSEVLSGGNL PPQKYPDSEG  60
VRNEMMFIPP TSDQVRDCDI GGDSLIGKHG IQDHGLSLSL STQIPQTVSL PSFQYQYPNS  120
SLSSVLSNAP VLGKGDEYNQ SEEFRNFESL ASGLYGGGHE AVKTQAFYNP LCSSGSKEMC  180
SEAYLDESLG SANTMLSSKY LKAAQQLLDE VVNVRKALKQ SRLNKNQSFK RSGIDGTKET  240
DGSDQHLRRS TDPSKSSAVS SIELSPSERQ DLQNKKTKLL SMLNEVDQRY KQYYHQMQAV  300
VSYFDKVAGN GAAGPYTALA LQAISRHFRS LRDAIKGQIQ VTRKSLGEQD NSSDGQGSVI  360
PRLRYVDQQL RQQRAFQQLG GLQHAWRPQR GLPESSVTIL RAWLFEHFLL PYPKDSEKIM  420
LARQTGLTRN QVANWFINAR VRLWKPMIED IYKEEFGDLD MDSKSSPENA LKEEARVDFS  480
ASEDRKEELH ESLISATADS IEPGKLHDSK SGHNSTYDMP RLDHFTVGSD VSLALELRHG  540
EEHNAFPPST GSHVRANDAV TSLDCHYEDP EQQHLIQHLD AYPPAFQTST TFPQALGVLP  600
SIHSLGERMS RSVGLVQAPT GTAMENQVQR LSLSLGSHLL VPSGQYRHHN FHTGEESGEA  660
CNRGVEHVGD EYCFMGGTLA SHSSALNRSC STSYGAESLA AVIANSKYLK PAQSLLEEIV  720
NVGGQLVDIS NEKHVGKLYG EGRRGGMGLS SELRAELSCN GGLMNADKHE MQARLANLIT  780
LLEQVEDRCE KYYHQMEQVM SSFEMVVGEG AAKSYTALAL KAMSRHFCSL RDGIVSHIYA  840
EKRKLLQDVP KISSGLSQLN LFDRECRHKR MSLQQLGIFQ SQRQAFRPIR GLPETSVAIL  900
RTWLFEHFLH PYPNDNEKLL LASQTGLSKN QVSNWFINAR VRLWKPMIEE MYKEELGESS  960
EDSNSLAGGS LTGEGNTDPT EN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75410.21e-106TALE family protein