PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022404.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 263aa    MW: 30169.8 Da    PI: 4.5671
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022404.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-3054112259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+++Hnh+
  PCP022404.1  54 SDLWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTSSHNHP 112
                  699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDETLSPEPD SDVSKNLRPE NQPSKRRKVA HEKTVVTVKI GANVGKLKNE GPPSDLWSWR  60
KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERSKTDASV LIITYTSSHN HPGPPDVNVI  120
STTQQEQEDD QKQEQEQEQE DDQEQEQEQD QKQDQDKKQD QEQEHGKLEE HFHYIESPIR  180
SSQDEHIFTA HDTSFGFLLD EEQEPLSLSY SQLMSFSTPK LSEENNDFFD ELEELPTFSS  240
FPSFMGRTNN LSFGIERIPS VPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.16e-38WRKY family protein