PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022307.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 347aa MW: 38939.4 Da PI: 9.281

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022307.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	90.7	3e-28	61	184	3	102
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................ssssas 71 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLl ++ i++l+ + + PCP022307.1 61 GGKDRHSKVSTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDITEQDIDKLPPLqvphgfghqfhqpmlnphkagnslvapffD----- 153 78*************************************************************777766666666665555444333332221..... PP TCP 72 ec.eaesssssasnsssgkaaksaakskksqk 102 + ++ ++ ++++++ +++ak + + ++ + PCP022307.1 154 -VnSTFMEADQVDHQEVHDQAKGKSIRTNDGQ 184 .1222233333333333333333332222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MITNSRDKGF QAKQEGHNNN NNNDGNNNSS FHKASSSSTT TSRQWSGFRN PRIVRVSRTF 60 GGKDRHSKVS TVRGLRDRRI RLSVPTAIQL YDLQDRLGLS QPSKVIDWLL DITEQDIDKL 120 PPLQVPHGFG HQFHQPMLNP HKAGNSLVAP FFDVNSTFME ADQVDHQEVH DQAKGKSIRT 180 NDGQDDQNRH DHEGNVSGQL LAQKLFPIGN HPSSIPGLLN NAMAYNYYHN YSEPSTLSLA 240 QFGSHEFPQV PQIDQHHSHM MSTNALSFST PMPSVSQLFF CPPTATPTLF GSYPPYITNP 300 IVEGTSTATD QPRQANHFQF LSSPSFPLPV LDMRMFGPIM TLKNRKK

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MITNSRDKGF QAKQEGHNNN NNNDGNNNSS FHKASSSSTT TSRQWSGFRN PRIVRVSRTF  60
GGKDRHSKVS TVRGLRDRRI RLSVPTAIQL YDLQDRLGLS QPSKVIDWLL DITEQDIDKL  120
PPLQVPHGFG HQFHQPMLNP HKAGNSLVAP FFDVNSTFME ADQVDHQEVH DQAKGKSIRT  180
NDGQDDQNRH DHEGNVSGQL LAQKLFPIGN HPSSIPGLLN NAMAYNYYHN YSEPSTLSLA  240
QFGSHEFPQV PQIDQHHSHM MSTNALSFST PMPSVSQLFF CPPTATPTLF GSYPPYITNP  300
IVEGTSTATD QPRQANHFQF LSSPSFPLPV LDMRMFGPIM TLKNRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	9e-48	TCP family protein