PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022102.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 382aa MW: 43020.2 Da PI: 7.6331

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022102.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	7.8e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++i+ PCP022102.1 25 FLTKTYQLVDDPATDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCEIH 112 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PCP022102.1 113 RRKTA 117 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MALMIDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGDDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPH 120 QVGLSHHHHH SQLGMNGHHH HPGFFPFPSP GSISPSDSDE QPNWCDSDSP PLLSPTGGIN 180 TNINSNNNNF MNINNNNTTV AGLAEDNERL RRSNTMLMSE LAHMRKLYND IIYFVQNHVK 240 PVAPSNSYPS SMLLCNPQPP KHNGPNGNLN QLLGYYPAAP PPNAKQNPHH IMNSSSPMSN 300 TTSKSSSVTI LEDHHQQPPS GNNGCKNTKL FGVPLLHSKK RLHPEEYGSN NHHGNNMMEA 360 SKARLILEKD DLGLHLMPPS RC

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MALMIDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGDDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPH  120
QVGLSHHHHH SQLGMNGHHH HPGFFPFPSP GSISPSDSDE QPNWCDSDSP PLLSPTGGIN  180
TNINSNNNNF MNINNNNTTV AGLAEDNERL RRSNTMLMSE LAHMRKLYND IIYFVQNHVK  240
PVAPSNSYPS SMLLCNPQPP KHNGPNGNLN QLLGYYPAAP PPNAKQNPHH IMNSSSPMSN  300
TTSKSSSVTI LEDHHQQPPS GNNGCKNTKL FGVPLLHSKK RLHPEEYGSN NHHGNNMMEA  360
SKARLILEKD DLGLHLMPPS RC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-102	HSF family protein