PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022060.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 342aa MW: 38612.1 Da PI: 5.7739

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022060.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.5	2.4e-34	13	104	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 F+ k+y++++d+++++li+w + +nsf+v+d+ f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+++ll+++ PCP022060.1 13 FVLKTYQMVNDPTTDNLITWGRANNSFIVVDPLVFSQRLLPAYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEWFLRGQTHLLRNVA 100 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ PCP022060.1 101 RRKQ 104 *997 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MMMEESNNVI APFVLKTYQM VNDPTTDNLI TWGRANNSFI VVDPLVFSQR LLPAYFKHNN 60 FSSFVRQLNT YGFRKVDPDK WEFANEWFLR GQTHLLRNVA RRKQMGKSSN SNSLFSTSNS 120 NFLPTKHEEL NDEDIIMEIS RLKQEQKALE EEIGNMNRRL ETTERRPQQM MAFLHKVAED 180 PEILPRMMLE KDRATTAQLG EKKRRVMMIA STSSSSSGMG ATTSFRTEDE DDGTVGVISS 240 SPEAGFEMES LNRYSTSPEV QTASDWLRQR RFVDQVRAVQ NPNNMNPTAS GHRAENIRNS 300 SSSGYGYGNG NGGGPGGEVG YFTEVEASPP PPYPFSLLEG GF

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MMMEESNNVI APFVLKTYQM VNDPTTDNLI TWGRANNSFI VVDPLVFSQR LLPAYFKHNN  60
FSSFVRQLNT YGFRKVDPDK WEFANEWFLR GQTHLLRNVA RRKQMGKSSN SNSLFSTSNS  120
NFLPTKHEEL NDEDIIMEIS RLKQEQKALE EEIGNMNRRL ETTERRPQQM MAFLHKVAED  180
PEILPRMMLE KDRATTAQLG EKKRRVMMIA STSSSSSGMG ATTSFRTEDE DDGTVGVISS  240
SPEAGFEMES LNRYSTSPEV QTASDWLRQR RFVDQVRAVQ NPNNMNPTAS GHRAENIRNS  300
SSSGYGYGNG NGGGPGGEVG YFTEVEASPP PPYPFSLLEG GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	6e-86	HSF family protein