PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021780.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 430aa MW: 46885.6 Da PI: 6.37

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021780.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.9	3.3e-11	238	284	14	60
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 Re+ArrsR+RK+a + Le v +L eN++L k+l +k++ + PCP021780.1 238 RESARRSRRRKQAHLTDLEGQVSQLRVENSSLLKRLTDSEKKYNEAA 284 9**************************************99998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MDRVFSVEEM SDQLWSSTAP PDNGGADDDN LSKLNRSASE WAFQRFLQEA SPYSPSPSPT 60 PPPPPHPSSS STAHHHDQND VEEIKMINAH HHNPTHTHYN NMRPPNVTVD SDEYRAFLKT 120 KLDLACAAVA LSREGSLVTV QESAALANSG SHASSASQLG SEAPSKGAGY DLSRSNDKNA 180 HAPLGAVPSL PATKCRSAIP VRQATSGSSR EMTDDEEAEG ETAMNENMDP ADVKRVRRES 240 ARRSRRRKQA HLTDLEGQVS QLRVENSSLL KRLTDSEKKY NEAAVDNRVL KADIEALRAK 300 VKMAEEMVKR FTGLNPMFHA MSEVSSIGMP PFDGSPSEAS IDAAVPEQDD PNHHFFQPAS 360 NNPIPTHDPR VKNDSADVPS VENVQKKSAA TSSADVSGNK MGRTPSLQRV ASLEHLQKRI 420 RGGNPSNWEQ

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MDRVFSVEEM SDQLWSSTAP PDNGGADDDN LSKLNRSASE WAFQRFLQEA SPYSPSPSPT  60
PPPPPHPSSS STAHHHDQND VEEIKMINAH HHNPTHTHYN NMRPPNVTVD SDEYRAFLKT  120
KLDLACAAVA LSREGSLVTV QESAALANSG SHASSASQLG SEAPSKGAGY DLSRSNDKNA  180
HAPLGAVPSL PATKCRSAIP VRQATSGSSR EMTDDEEAEG ETAMNENMDP ADVKRVRRES  240
ARRSRRRKQA HLTDLEGQVS QLRVENSSLL KRLTDSEKKY NEAAVDNRVL KADIEALRAK  300
VKMAEEMVKR FTGLNPMFHA MSEVSSIGMP PFDGSPSEAS IDAAVPEQDD PNHHFFQPAS  360
NNPIPTHDPR VKNDSADVPS VENVQKKSAA TSSADVSGNK MGRTPSLQRV ASLEHLQKRI  420
RGGNPSNWEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	249	RRSRRRKQ
2	244	249	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-62	bZIP family protein