PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021633.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 347aa    MW: 38808.8 Da    PI: 5.8778
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021633.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.6e-30136197159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp+++eitY+g+H+++
  PCP021633.1 136 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPTIFEITYRGKHTCT 197
                  59***************************98999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MENCNIHWEQ KSLVDELAQG RELARQLQIH LNVPSSSYGT RELLVQKIIL SYEKALSMLN  60
SSSSASGGEQ QLPTGHVAIR MVESPPHSLN ESPRSEDSDR EFKDHDNKDS SRKRKNLPRW  120
TQQIRVTSGM GLEGPLDDGF SWRKYGQKDI LGAKYPRGYY RCTHRNVQGC LATKQVQRSD  180
EDPTIFEITY RGKHTCTQAS AGTSTPPSPS PLQPERTERQ NNLVDPQQNQ QQSQQHTLLN  240
LPEGLRVITE GLDTREELFP SFNSPSPLNN SYVGSFYPPF AGPTTSGTNY FSMSQRDFEV  300
DQNFQSGEII SAPTSATNSP SVGLDIPFGQ ADQLFPNFSF DGPGFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-54WRKY family protein