PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021482.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 271aa    MW: 31358.4 Da    PI: 7.2835
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021482.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-15148255199
                  EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SS.S CS
           B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgr.s 88 
                  f+k+lt+sdv  + +r+ + k+ +e+h       g+++ +++ +t +d +g+ + + ++ + ++  +vlt+GWk+Fv+++gL    Dfv++ + ++ +
  PCP021482.1 148 FEKQLTSSDVRDNqCRFAINKEDVENHiflllkkGEDTSKGIHVTTYDVDGNDYPMVFKLWAGK-IHVLTGGWKNFVHDHGLVeKQDFVTLWVFRNaE 244
                  99********9888*******************988999*******************999987.689**************8689***999888889 PP

                  EE..EEEEE-S CS
           B3  89 efelvvkvfrk 99 
                  +++l++ + ++
  PCP021482.1 245 NGSLCFVISSR 255
                  99888887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MNPKRNTRLG ESSRQDMDDQ DNEEDPNYKD KAMTTKEGAL ILIHMKHKVL DSDSARELED  60
MKCKFLGSNY WKKKYSHEGT KRKRIIQETE APETLDATNN VAVAQGQQSW PQEEEVEGEG  120
LFYGNYAPPD VPRVPRIQHL IQVCSKPFEK QLTSSDVRDN QCRFAINKED VENHIFLLLK  180
KGEDTSKGIH VTTYDVDGND YPMVFKLWAG KIHVLTGGWK NFVHDHGLVE KQDFVTLWVF  240
RNAENGSLCF VISSRRLPVY ETIKKRRLRS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.15e-28B3 family protein