PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021309.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 167aa    MW: 18787.8 Da    PI: 9.9149
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021309.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000452446123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C+++F++   L  H  +H
  PCP021309.1 24 FECKTCNRTFTSFQALGGHRASH 46
                 89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MAKCLMLPSF GMETKFKTCS NDVFECKTCN RTFTSFQALG GHRASHKRPR TSMSRDDEDR  60
KDEREKGNDK FMVMNKKAKT HECSICGLEF GMGQALGGHM RRHRASNMDM ASFSYAPSAI  120
TSKIPVLTRS SSKRVMSLEM DLNLTPLEND LKLLFGKMAP KVDAFVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-41C2H2 family protein