PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP021153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 225aa MW: 26147.5 Da PI: 9.3571 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 40.3 | 4.1e-13 | 12 | 51 | 3 | 42 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 i n+ r+ ++ kR++g KK +E+S+LCd+ v+ i++s+ PCP021153.1 12 IINDACRKASYNKRKKGFVKKMKEISILCDVPVCGILYSQ 51 668999********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MAGRKKVKLA YIINDACRKA SYNKRKKGFV KKMKEISILC DVPVCGILYS QYESQPIVWP 60 NPLEVQRLIT QFRNMPEEER NKKMVNHEMF LKQRIEKEQE KLNKLKKENR EKQIRMLMNQ 120 CLAGRPLTDL NLDALNDLDC MIKGSLTEIV TQIKSRKEKE LGEMNQPQVA PPQVLAATTD 180 QNMHAAMETQ VFDQSNIYTK QTVPWFLGDV PYQQFGFADD QIPPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G05860.2 | 5e-29 | M-type_MADS family protein |