PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP021152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 213aa MW: 24600.5 Da PI: 9.4276 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 46 | 6.8e-15 | 10 | 52 | 2 | 44 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 +ien+s r+ tf kRr+g +KK +E+ LCd+ + i++s+++ PCP021152.1 10 FIENDSSRKATFRKRRTGFMKKMYEINKLCDVPTCAIMYSPDQ 52 8***************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MTKRKLKLAF IENDSSRKAT FRKRRTGFMK KMYEINKLCD VPTCAIMYSP DQPQPDVWPD 60 PSEVRRLIEL FKNVPEKERN KKMVTHGMFL KQRIEKEQEK LNKLKKDNRE KELRMAMSQC 120 LAGKPLNGLD FTNLQEMGWM IDEKLKDIAV TKCRKENELA EINQPLVGQP PAHATSADEN 180 TQDAIQLAPW SVGGVRSSKF GEVDDQIMPL GDY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 25 | KRKLKLAFIENDSSRKATFRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 4e-30 | M-type_MADS family protein |