PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021133.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 307aa    MW: 34462.4 Da    PI: 6.8405
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021133.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.32.7e-22127187259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg +WrKYGqK + ++ +pr+Y+rCt +   gC+++k+v++ +++p++ ++tY geH+++
  PCP021133.1 127 EDGQAWRKYGQKIILKASYPRAYFRCTRKydqGCMATKQVQQIQDNPRTYQTTYIGEHTCR 187
                  89*************************998899**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGTNHKRLIE ELLEGRKTAV ELQNLLHKPF GDSGSAEELL MKIMTTFTES LSVLTASDGH  60
EDHQSAASGE VYQVKPEPSH VEHSHCGDRS SEGSGESPKT QAFKDRRGCY KRRKTSQSWT  120
VISTKIEDGQ AWRKYGQKII LKASYPRAYF RCTRKYDQGC MATKQVQQIQ DNPRTYQTTY  180
IGEHTCRTMI KASPTIIGPD PRRSQTVSSE SGSPHRQNPN FFGSSSSSIP IVKQEDSKVG  240
TPDNNVWLGL KDHFGLSEPA GICVSSNENV VSNMQWDDMD LVKSINFECD INFDEAEFPI  300
TPCNDRF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111138KRRKTSQSWTVISTKIEDGQAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-41WRKY family protein