PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020892.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 352aa MW: 40589.1 Da PI: 6.9009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020892.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W+t ++ g+ R++k+c++rw +yl PCP020892.1 14 KGPWTPEEDQKLMDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	56.1	8.8e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e ++++++ lG++ W++Ia++++ gRt++++k++w+++ PCP020892.1 67 RGRFSFEEEETIIQLHTILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGRTPCCDKN GLKKGPWTPE EDQKLMDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHTILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDFSSILY NSSHHHHQMN NFSRLLGQPI GLNPELLRLA TSLIQSRREN 180 NSNQNFVLQN AQENDYHQIC NPQIQPQQPV QDNVPYPNEV SQLMQQQPNV EYPSSLSDFR 240 SQKSQLNEWQ SNVGTSNFTE EYVELPSFAY FGSEQHQTVL DLSPETSNFH SNNSNQNFSF 300 TSVFSTPSSS PTTLNSNSTT YFNSGTEDER ESYCSNMLKF GIPDILGVNE FM

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGRTPCCDKN GLKKGPWTPE EDQKLMDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHTILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDFSSILY NSSHHHHQMN NFSRLLGQPI GLNPELLRLA TSLIQSRREN  180
NSNQNFVLQN AQENDYHQIC NPQIQPQQPV QDNVPYPNEV SQLMQQQPNV EYPSSLSDFR  240
SQKSQLNEWQ SNVGTSNFTE EYVELPSFAY FGSEQHQTVL DLSPETSNFH SNNSNQNFSF  300
TSVFSTPSSS PTTLNSNSTT YFNSGTEDER ESYCSNMLKF GIPDILGVNE FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-113	MYB family protein