PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP020530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GRAS | ||||||||
Protein Properties | Length: 139aa MW: 16427 Da PI: 7.3386 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 105.7 | 6.6e-33 | 8 | 136 | 245 | 373 |
GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr 342 +a++n++ F++rf eal +ysal+d+++ k+pr++eer + E e+ gre++nv+aceg er+er et+++W+ r ++aG++ +pl+++ +k k ++ PCP020530.1 8 NASYNAPFFVTRFREALFHYSALYDAFDIKIPRDNEERLMFESEFYGREAMNVIACEGVERVERPETYKQWQVRCMRAGLQLLPLDQDLVKIFKDKVK 105 7899********************************************************************************************** PP GRAS 343 kvksdgyrveeesgslvlgWkdrpLvsvSaW 373 + + y ++++s+++++g k+r +++ S+W PCP020530.1 106 AWYHKDYVIDQDSAWMLQGLKGRIVYASSCW 136 ***888************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MKPLSIINAS YNAPFFVTRF REALFHYSAL YDAFDIKIPR DNEERLMFES EFYGREAMNV 60 IACEGVERVE RPETYKQWQV RCMRAGLQLL PLDQDLVKIF KDKVKAWYHK DYVIDQDSAW 120 MLQGLKGRIV YASSCWVPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07520.1 | 2e-64 | GRAS family protein |