PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020453.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 288aa    MW: 33003 Da    PI: 10.6255
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020453.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.58.8e-17166263197
                  EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                  f+ v +++++ +s+ l+l+ +f+++h    g+  +  ++ le +s rsW vk+++   ++++     +GWk Fv++n++++gD +vF+l+++ ++++ 
  PCP020453.1 166 FLVVKMQPSYIASQ-LRLSVPFVKQHvcaRGI--C--DMNLEISSRRSWPVKCRVgvYRRKQYARVYDGWKAFVRENRVEVGDACVFELINKgRTRNA 258
                  56677788888886.999********776444..3..8***************996655555577789*********************987788888 PP

                  EEEEE CS
           B3  93 vvkvf 97 
                  ++k+ 
  PCP020453.1 259 TFKIS 263
                  88876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MASSSRRDDG DSPLPAKVPT FFKIVLDKAL RDGRLEIPPA FVMKNEDCPP DSVFLKDPTG  60
RVWRIELTRR CGKVVFLHFL VRIFRRNTLE IDYPISSSHD GVPKLCGGFQ LPKNEEHGDN  120
VFVKILDSPR PKTRSRGGMY TDEEKTTRLS DRAFSRAVSF KSSNPFLVVK MQPSYIASQL  180
RLSVPFVKQH VCARGICDMN LEISSRRSWP VKCRVGVYRR KQYARVYDGW KAFVRENRVE  240
VGDACVFELI NKGRTRNATF KISSDSSFTR EHKRTFIAWA TSGLGQRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-12B3 family protein