PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020083.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 1891aa MW: 211255 Da PI: 6.9745

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020083.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59	8.4e-19	1321	1421	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++l PCP020083.1 1321 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGRL 1414 99************************555556677***********99899999999.*******************987.89999 PP EEEEE-S CS B3 93 vvkvfrk 99 v++++++ PCP020083.1 1415 VIGFRKA 1421 9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1891 aa Download sequence
MDLLLLEKTL LGLFVAVIVA IAISKLRGKK FKFPPGPIPV PVFGNWLQVG NDLNHRNLSD 60 LAKKFGDCFL LRMGQHNLLL VSSPELAKEV LHTQGVEFGS RSRTVVVDIF TGKGQDMVFS 120 VYGEHWRKMR RIMTVPFLTN KVVQLYRHGL ESEAAAVVED VKKQPEAATS GMVLRRRLQL 180 MMYNNVYRIM FDRRFESEKD PLFVKLKMCK EVKEKRMQLF KDYFIDERKK IWSTQATTNE 240 GLKCAIDHLL DAQHKGEIND DNIYYILDNI NAAAIDTTLW SIEWGIVELV NHPEIQKKLS 300 EELDAVLGRG VQITEPDVQK LPYLQAVIKE TLRLHMPTPL LVPHMNLLDA KLGGFDIPAE 360 SKILVNAGWL TNNPALWRKP KEFRPERFLE EESKVEANGN DFRYLPFGVG RRSCPGIILA 420 LSILGITFGR LVQNLELLPP PGQSKVDTSE KCGQFTLQIL KHSTIVMKPR AQRNIRIRST 480 KLQKNDRDFV FSNRARHHPV GRNYDFGGVT RQPDWSCFVN EDERDDLSSL RLLVAFFCFH 540 SFLPLLGLIK SYVSLPSVSF ASEESCSSSA ANNMAEENSV NQEAESYLAS SATNFSEVDI 600 NPNQRLSSVL LNEFNYLPWS RTISLVLGGR AQGQSLWFSV EGPSLASSME SLKHQKFRLQ 660 IMKHGCARIR NGKVEEATVI ESENHSAMLG KFAGFLAEAE GVPHKAVPDP RSIKCVFLGY 720 SSTHKGYKCF NPVTNKMVVS RDVKFEESIP YFHKGTTDSS KGETWEDLIS LPNHIGDINS 780 DYLQVDVTHV PTSDASHPPD SSSYQEVDQV DAIHAPASDT SPCNQEVDPL LVKRNPPKAR 840 QPPPKLLDYV TYAARHPISL AYHRYSHSHA AFLSAILNHH EPYTFQEANM HTKWRQAMDE 900 ELRALNDNHT WSIVHLPCGK KAVGSRVDYK ETYAPVAKMN TVWVRLSVAV NQGSLDKLVV 960 LIYIDDLIIT GDNMEEIVSL KQSLHQKFAI KDLAHSIELA PQPPPFLGGF QSVFLLCSWM 1020 TSGFRDLGFD LGFDLDKTRV EYENSVYCNT FHSGETGWRD CNLCHKPLHC GCIVSETLYE 1080 CLDFGGIGCI GCASQPRVIQ NDDVLNGFGG LKISNSGDQQ STVPQNGALS DTANEGKLLQ 1140 LCQVMEANES NLSSQSQRSD INVSPVQTKR EEVTYPKGEV GPGFSSITRP SIGSLTFTKP 1200 DNGRIMIGVK DMNNPSSEPS LSMTLGGPSA TPNFAQPFTG GILEGRDQSK MPSSFQQGQK 1260 IRPILPRPLR PPSPVHHVRV ARPPSEGRGK SQLLPRYWPR ITDQELQKLA GDLNSTIVPL 1320 FEKVLSASDA GRIGRLVLPK ACAEAYFPPI SQSEGLPIRI QDVKGNEWTF QFRFWPNNNS 1380 RMYVLEGVTP CIQSMQLQAG DTVTFSRIDP GGRLVIGFRK ASRSLDMQDP QTSFLPNGTP 1440 GETSCPSVVE NLVSGSGQSS LYQTNTGSKD PYLNALSGHL HLADGDTSLH NCENHSHLTS 1500 EDLLQRPVSN SDKKRARNIG PKSKRLLLHR EDVLELRLTW EEAQDLLRPP PSVKPSIVTI 1560 EDHEFEEYDE PPVFGKRSLF IAESERQEQW AQCDDCFKWR RLPVNVFLPP KWTCSENSWD 1620 MNRCSCSAPE EVSQKELDNL LRPSIDLKKR RIVVNHNEAQ EHEPSGLDAL ASASAAILGD 1680 NVDYSGDQSL GATTRHPRHR PGCTCIVCIQ PPSGKGKHKP TCTCNVCMTV KRRFKTLMMN 1740 KRKRKSEREA ENAQRDNNDH KDESEMNGTS TEIELHMNHS SENGSSSEKR IEADVAESSC 1800 AGQIDLNCEP KHNYVQVSGL NLLRLADAVA CQPVKNGTKE SFLTNKTCEP QAGLGSSLLA 1860 QETAETDRLM CNEGSLSSVA AWDLEGRGGV D

Sequence ? help Back to Top

Protein Sequence Length: 1891 aa Download sequence

MDLLLLEKTL LGLFVAVIVA IAISKLRGKK FKFPPGPIPV PVFGNWLQVG NDLNHRNLSD  60
LAKKFGDCFL LRMGQHNLLL VSSPELAKEV LHTQGVEFGS RSRTVVVDIF TGKGQDMVFS  120
VYGEHWRKMR RIMTVPFLTN KVVQLYRHGL ESEAAAVVED VKKQPEAATS GMVLRRRLQL  180
MMYNNVYRIM FDRRFESEKD PLFVKLKMCK EVKEKRMQLF KDYFIDERKK IWSTQATTNE  240
GLKCAIDHLL DAQHKGEIND DNIYYILDNI NAAAIDTTLW SIEWGIVELV NHPEIQKKLS  300
EELDAVLGRG VQITEPDVQK LPYLQAVIKE TLRLHMPTPL LVPHMNLLDA KLGGFDIPAE  360
SKILVNAGWL TNNPALWRKP KEFRPERFLE EESKVEANGN DFRYLPFGVG RRSCPGIILA  420
LSILGITFGR LVQNLELLPP PGQSKVDTSE KCGQFTLQIL KHSTIVMKPR AQRNIRIRST  480
KLQKNDRDFV FSNRARHHPV GRNYDFGGVT RQPDWSCFVN EDERDDLSSL RLLVAFFCFH  540
SFLPLLGLIK SYVSLPSVSF ASEESCSSSA ANNMAEENSV NQEAESYLAS SATNFSEVDI  600
NPNQRLSSVL LNEFNYLPWS RTISLVLGGR AQGQSLWFSV EGPSLASSME SLKHQKFRLQ  660
IMKHGCARIR NGKVEEATVI ESENHSAMLG KFAGFLAEAE GVPHKAVPDP RSIKCVFLGY  720
SSTHKGYKCF NPVTNKMVVS RDVKFEESIP YFHKGTTDSS KGETWEDLIS LPNHIGDINS  780
DYLQVDVTHV PTSDASHPPD SSSYQEVDQV DAIHAPASDT SPCNQEVDPL LVKRNPPKAR  840
QPPPKLLDYV TYAARHPISL AYHRYSHSHA AFLSAILNHH EPYTFQEANM HTKWRQAMDE  900
ELRALNDNHT WSIVHLPCGK KAVGSRVDYK ETYAPVAKMN TVWVRLSVAV NQGSLDKLVV  960
LIYIDDLIIT GDNMEEIVSL KQSLHQKFAI KDLAHSIELA PQPPPFLGGF QSVFLLCSWM  1020
TSGFRDLGFD LGFDLDKTRV EYENSVYCNT FHSGETGWRD CNLCHKPLHC GCIVSETLYE  1080
CLDFGGIGCI GCASQPRVIQ NDDVLNGFGG LKISNSGDQQ STVPQNGALS DTANEGKLLQ  1140
LCQVMEANES NLSSQSQRSD INVSPVQTKR EEVTYPKGEV GPGFSSITRP SIGSLTFTKP  1200
DNGRIMIGVK DMNNPSSEPS LSMTLGGPSA TPNFAQPFTG GILEGRDQSK MPSSFQQGQK  1260
IRPILPRPLR PPSPVHHVRV ARPPSEGRGK SQLLPRYWPR ITDQELQKLA GDLNSTIVPL  1320
FEKVLSASDA GRIGRLVLPK ACAEAYFPPI SQSEGLPIRI QDVKGNEWTF QFRFWPNNNS  1380
RMYVLEGVTP CIQSMQLQAG DTVTFSRIDP GGRLVIGFRK ASRSLDMQDP QTSFLPNGTP  1440
GETSCPSVVE NLVSGSGQSS LYQTNTGSKD PYLNALSGHL HLADGDTSLH NCENHSHLTS  1500
EDLLQRPVSN SDKKRARNIG PKSKRLLLHR EDVLELRLTW EEAQDLLRPP PSVKPSIVTI  1560
EDHEFEEYDE PPVFGKRSLF IAESERQEQW AQCDDCFKWR RLPVNVFLPP KWTCSENSWD  1620
MNRCSCSAPE EVSQKELDNL LRPSIDLKKR RIVVNHNEAQ EHEPSGLDAL ASASAAILGD  1680
NVDYSGDQSL GATTRHPRHR PGCTCIVCIQ PPSGKGKHKP TCTCNVCMTV KRRFKTLMMN  1740
KRKRKSEREA ENAQRDNNDH KDESEMNGTS TEIELHMNHS SENGSSSEKR IEADVAESSC  1800
AGQIDLNCEP KHNYVQVSGL NLLRLADAVA CQPVKNGTKE SFLTNKTCEP QAGLGSSLLA  1860
QETAETDRLM CNEGSLSSVA AWDLEGRGGV D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1731	1745	KRRFKTLMMNKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein