PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020011.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 298aa    MW: 31601.7 Da    PI: 7.9446
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY292.2e-09251270221
                  --SS-EEEEEEE--TT-SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefp 21 
                  +D ++WrKYGqK++kgs+fp
  PCP020011.1 251 SDLWAWRKYGQKPIKGSPFP 270
                  699****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MPITRMENYQ GDLTDILRAG TTTANVVAYP SDHQEPHTDT WHFPSDHPLI FPSSSLAMEE  60
EEAKDNFGDP FSSYMRDPLL NELDISSSSL FSSPSCTARV EEGVTTTTFG GGGGHHVLSL  120
GHHNHQSGGV VVDGDPIKRP CNIFSQMLQI SPSAKIPMSP CDSPVIGGAV SSSPRGIKTS  180
PDSAAMVASD MIINGNSSSA ATGCLLGNTG MQISSPRNPG IKRRKSQAKK VVCIPAPAAA  240
NSRPTGEVVP SDLWAWRKYG QKPIKGSPFP SVLKGSPQGA SRRPLRLGVS VPAFVLRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.16e-40WRKY family protein