PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019985.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 279aa MW: 31283.9 Da PI: 4.6763

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019985.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ +G +W+++++ g++R++k+c++rw +yl PCP019985.1 14 KGPWTAEEDKKLVNFLLTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.1	6.2e-16	73	111	7	47
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ PCP019985.1 73 AEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 69************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLVNFLL THGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NDAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPITHEPLH KQVITPEEMP CEASDQPAGS DVNIPQNMDI PEHEVYSNSE ASNQPAGLDM 180 NIPRNMNIPE HEISSNSDGG GSASENSPSN ESQSAEPNPN YIEEGDPLVS FILSDTFLED 240 LTWDFSTSSE DGSADNPTEE NSLAWFMDCK DFGVQDFEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	1e-87	MYB family protein