PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019959.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 790aa MW: 91205.5 Da PI: 7.4706

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019959.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.4	3.1e-20	72	147	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vr+ + ++s+++g++ +r+fvCskeg++ + +rtgC a ++v+++++gkw+v+ + ++HnH l PCP019959.1 72 DFYTFYAARMGFKVRTGQLYRSRTDGSVSSRRFVCSKEGFQIS--------------SRTGCPALIRVQRRDSGKWVVDLFLKDHNHGLE 147 6*************************************765..............699*************************996 PP
2	FAR1	67.3	4e-21	227	302	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GF++r+ + +sk +g+it+r+fvCskeg++++ +r+gC a +++k++++g+w+v++++++HnHe+ PCP019959.1 227 QFYHAYAENTGFRIRIGQLFRSKLDGSITSRRFVCSKEGFQHP--------------SRVGCGAYMRIKRQDSGRWVVDRFDKNHNHEFE 302 6*************************************999..............4899************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MGMESSSTHF TNIRSLDTDS KIEDSGNNLV IEAYPLGMMP PMNAVDAEDE GESGVPEPYV 60 GLDFDSADVA RDFYTFYAAR MGFKVRTGQL YRSRTDGSVS SRRFVCSKEG FQISSRTGCP 120 ALIRVQRRDS GKWVVDLFLK DHNHGLESST EENHNLILQK KSSMPTNTVV EVSHRPKVKL 180 IKAIEDKPHC PSAVISAKRL KRGGEEMQSE IDLSAGLEFN SANEAYQFYH AYAENTGFRI 240 RIGQLFRSKL DGSITSRRFV CSKEGFQHPS RVGCGAYMRI KRQDSGRWVV DRFDKNHNHE 300 FESHLEVQKK NLFSSKKFIE EEIGGLEIED IVDINSGNLV KRRRENHVGS DWYGVLFDYC 360 QTRQAEDTGF FYAVEVDNGS CMSIFWADGR SRFSCSQFGD AIILDTSYRK SIYLVPFVTF 420 IGINHHKQPV LLGCALVADE SEKSFTWLFQ TWLRAMSGRR PLSIIADQDD MIQQAIMQVF 480 PGTHHRFSLW QIKAKESEHL SVMNSSFKYE YEKCIYQCQT ADEFETAWNA LLSRYGLKDN 540 AWLKAMYEKR RSWVPLYLRA TFFAGIPFNE SIESFFGARF NAQTSLKEFV SQYERGLERR 600 REEEIKEDFN SFNLKAYLQT KEPLEEQCRR LYTLNTFRVF QKELLQSYSY LGFKIYDEGA 660 IIRYLVRKCG NDDEKYVVTV GASIPEVSCS CRMFEFEGIL CRHVLRVFQI LDIKEVPPCY 720 ILRRWTRNAE YGIPCESELG GNPRELKTLM VWSLREAACK YIEAGATSLE KHKLAYEIMR 780 EGGRKLCWQR

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MGMESSSTHF TNIRSLDTDS KIEDSGNNLV IEAYPLGMMP PMNAVDAEDE GESGVPEPYV  60
GLDFDSADVA RDFYTFYAAR MGFKVRTGQL YRSRTDGSVS SRRFVCSKEG FQISSRTGCP  120
ALIRVQRRDS GKWVVDLFLK DHNHGLESST EENHNLILQK KSSMPTNTVV EVSHRPKVKL  180
IKAIEDKPHC PSAVISAKRL KRGGEEMQSE IDLSAGLEFN SANEAYQFYH AYAENTGFRI  240
RIGQLFRSKL DGSITSRRFV CSKEGFQHPS RVGCGAYMRI KRQDSGRWVV DRFDKNHNHE  300
FESHLEVQKK NLFSSKKFIE EEIGGLEIED IVDINSGNLV KRRRENHVGS DWYGVLFDYC  360
QTRQAEDTGF FYAVEVDNGS CMSIFWADGR SRFSCSQFGD AIILDTSYRK SIYLVPFVTF  420
IGINHHKQPV LLGCALVADE SEKSFTWLFQ TWLRAMSGRR PLSIIADQDD MIQQAIMQVF  480
PGTHHRFSLW QIKAKESEHL SVMNSSFKYE YEKCIYQCQT ADEFETAWNA LLSRYGLKDN  540
AWLKAMYEKR RSWVPLYLRA TFFAGIPFNE SIESFFGARF NAQTSLKEFV SQYERGLERR  600
REEEIKEDFN SFNLKAYLQT KEPLEEQCRR LYTLNTFRVF QKELLQSYSY LGFKIYDEGA  660
IIRYLVRKCG NDDEKYVVTV GASIPEVSCS CRMFEFEGIL CRHVLRVFQI LDIKEVPPCY  720
ILRRWTRNAE YGIPCESELG GNPRELKTLM VWSLREAACK YIEAGATSLE KHKLAYEIMR  780
EGGRKLCWQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein