PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019940.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 836aa MW: 95251.8 Da PI: 8.1303

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019940.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.4	6.4e-20	59	145	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y +Y+ + GF+vrk++ k++ + g + + t+vCsk+g+r++++k+ e+ + +++r+gC+a+++ ++k+gk+++++++ HnH+l PCP019940.1 59 YVKYGAKHGFDVRKHHRKTN-KMGLVSRVTYVCSKQGHRRKDNKRCESITYSLPSSRVGCEAHMVCLLMKTGKFKIISFNASHNHDLI 145 99*********9887766.7778****************999999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
MEKNDCTRLS SESLSGEEVD LQGNGSSLRS NDPDKVEEMT EDLKLGIEFS SHDSAYVAYV 60 KYGAKHGFDV RKHHRKTNKM GLVSRVTYVC SKQGHRRKDN KRCESITYSL PSSRVGCEAH 120 MVCLLMKTGK FKIISFNASH NHDLIKAPMK HMLKVNRCLS RAQKGHVADG EKSRSPIKET 180 VELVSREVEG QENLGSGDND YRNYLQRKRK LKMEKGDAGA ILQYFQNMRE DNSSCFYSVQ 240 LDEDDRITNI FWADARSVCD YKAFGDVVCF DTTYQINEYG RPFAPLIGVN HHKQIVVFGA 300 ALLYDDSRDS FKWLFETFLA AMSGKQPKTI LTDQSAAMAE AILEVFPEAN HRLCAWHIYQ 360 KAAKNLSHVF HASKQFACDL SKCVYEYEDK DAWLSAWNDM LENYDLKEDN WLKEIYEVRE 420 KWALVYERHT FTADLMSIQH KESITNVLKK HLMPSHDLLC FFEHFENILA DRRDKELQAD 480 FKMMQTVPSP VINVEMLERA VEVYTPEVFR LFEKEYMGIL NCSVYKIGKS GTTSEYKVSY 540 RSHEHLVKYD GSTQAVNCSC MKLTFVGILC SHALKVLDKK NVKTIPPDYI LKRWTRGARD 600 RSLTSFHGIE TSNNPRESPG KRYSHLCHNF REIASLAAED ERLTACAHDW SVQLLKSLEE 660 MKKNLGLDNV PVHKNSEGEA LVGESGGTKQ VKMVKHNDCE ITKERGVKRK HTAKCPCSRL 720 TEPAETQKHI PPTKGTQYAA RHWLLEGSSV GARTQVSLPS HRFDASATVN LQGTPPFTQH 780 RQGSYVDNGN QVSYSSKTFG ATPSFLNNMH FTQLCQEPSR HHNHCSQSNG GKESGN

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

MEKNDCTRLS SESLSGEEVD LQGNGSSLRS NDPDKVEEMT EDLKLGIEFS SHDSAYVAYV  60
KYGAKHGFDV RKHHRKTNKM GLVSRVTYVC SKQGHRRKDN KRCESITYSL PSSRVGCEAH  120
MVCLLMKTGK FKIISFNASH NHDLIKAPMK HMLKVNRCLS RAQKGHVADG EKSRSPIKET  180
VELVSREVEG QENLGSGDND YRNYLQRKRK LKMEKGDAGA ILQYFQNMRE DNSSCFYSVQ  240
LDEDDRITNI FWADARSVCD YKAFGDVVCF DTTYQINEYG RPFAPLIGVN HHKQIVVFGA  300
ALLYDDSRDS FKWLFETFLA AMSGKQPKTI LTDQSAAMAE AILEVFPEAN HRLCAWHIYQ  360
KAAKNLSHVF HASKQFACDL SKCVYEYEDK DAWLSAWNDM LENYDLKEDN WLKEIYEVRE  420
KWALVYERHT FTADLMSIQH KESITNVLKK HLMPSHDLLC FFEHFENILA DRRDKELQAD  480
FKMMQTVPSP VINVEMLERA VEVYTPEVFR LFEKEYMGIL NCSVYKIGKS GTTSEYKVSY  540
RSHEHLVKYD GSTQAVNCSC MKLTFVGILC SHALKVLDKK NVKTIPPDYI LKRWTRGARD  600
RSLTSFHGIE TSNNPRESPG KRYSHLCHNF REIASLAAED ERLTACAHDW SVQLLKSLEE  660
MKKNLGLDNV PVHKNSEGEA LVGESGGTKQ VKMVKHNDCE ITKERGVKRK HTAKCPCSRL  720
TEPAETQKHI PPTKGTQYAA RHWLLEGSSV GARTQVSLPS HRFDASATVN LQGTPPFTQH  780
RQGSYVDNGN QVSYSSKTFG ATPSFLNNMH FTQLCQEPSR HHNHCSQSNG GKESGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein